Fold library entry viewer: d3bnea1

Added to library: Tue Mar 16 14:41:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	S	E	T	P	A	P	L	V	E	Y	R	E	E	E	L	K	S	L	R	G	N	G	T	G	E	R	K	E	Y	D	R	I	Y	D	Y	D	V	Y	N	D	L	G	N	P	D	K	S	E	K	L	A	R	P	V	L	G	G	S	S	T	F	P	Y	P	R	R	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S		G	G	G															S		S				T	T									B		S	S			T	T	T		G	G	G					B	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	R	G	P	T	V	T	D	P	N	T	E	K	Q	G	E	V	F	Y	V	P	R	D	E	N	L	G	H	L	K	S	K	D	A	L	E	I	G	T	K	S	L	S	Q	I	V	Q	P	A	F	E	S	A	F	D	L	K	S	T	P	I	E	F	H	S	F	Q	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B		S	S		T	T	S	B				S	S					G	G	G	S				S	S	G	G	G												T											T	T	S	S		S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	D	L	Y	E	G	G	I	K	L	P	R	D	V	I	S	T	I	I	P	L	P	V	I	K	E	L	Y	R	T	D	G	Q	H	I	L	K	F	P	Q	P	H	V	V	Q	V	S	Q	S	A	W	M	T	D	E	E	F	A	R	E	M	I	A	G	V	N	P	C	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T													T	T	S	T	T	G	G	G	G					S	S	S								G	G	G	S	S		S	S	G	G	G	S											S	S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	G	L	E	E	F	P	P	K	S	N	L	D	P	A	I	Y	G	D	Q	S	S	K	I	T	A	D	S	L	D	L	D	G	Y	T	M	D	E	A	L	G	S	R	R	L	F	M	L	D	Y	H	D	I	F	M	P	Y	V	R	Q	I	N	Q	L	N	S	A	K	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S					S														G	G	G				T	T									T	T																				T	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	T	R	T	I	L	F	L	R	E	D	G	T	L	K	P	V	A	I	E	L	S	L	P	H	S	A	G	D	L	S	A	A	V	S	Q	V	V	L	P	A	K	E	G	V	E	S	T	I	W	L	L	A	K	A	Y	V	I	V	N	D	S	C	Y	H	Q	L	M	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S															T	T														S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	L	N	T	H	A	A	M	E	P	F	V	I	A	T	H	R	H	L	S	V	L	H	P	I	Y	K	L	L	T	P	H	Y	R	N	N	M	N	I	N	A	L	A	R	Q	S	L	I	N	A	N	G	I	A	E	T	T	F	L	P	S	K	Y	S	V	E	M	S	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T															S		T	T								G	G	G	G	T	T												T	S	S	T	T	S						S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	Y	K	N	W	V	F	T	D	Q	A	L	P	A	D	L	I	K	R	G	V	A	I	K	D	P	S	T	P	H	G	V	R	L	L	I	E	D	Y	P	Y	A	A	D	G	L	E	I	W	A	A	I	K	T	W	V	Q	E	Y	V	P	L	Y	Y	A	R	D	D	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			G	G	G	G	S								T	T	S					T	T	S	T	T	S				S	S	S	S																						G	G	G	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	N	D	S	E	L	Q	H	W	W	K	E	A	V	E	K	G	H	G	D	L	K	D	K	P	W	W	P	K	L	Q	T	L	E	D	L	V	E	V	C	L	I	I	I	W	I	A	S	A	L	H	A	A	V	N	F	G	Q	Y	P	Y	G	G	L	I	M	N	R	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T														T	T	T	G	G	G	T	T		T	T	S					S																T								T	T						S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	S	R	R	L	L	P	E	K	G	T	P	E	Y	E	E	M	I	N	N	H	E	K	A	Y	L	R	T	I	T	S	K	L	P	T	L	I	S	L	S	V	I	E	I	L	S	T	H	A	S	D	E	V	Y	L	G	Q	R	D	N	P	H	W	T	S	D	S	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B							T	T	S																		B																	T		B		T	T			B	T	T			S		T	T	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Sequence	Q	A	F	Q	K	F	G	N	K	L	K	E	I	E	E	K	L	V	R	R	N	N	D	P	S	L	Q	G	N	R	L	G	P	V	Q	L	P	Y	T	L	L	Y	P	S	S	E	E	G	L	T	F	R	G	I	P	N	S	I	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G					T	T	T	T	T					T	T		S				S	B	S		S				B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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