Fold library entry viewer: d2vjma1

Added to library: Tue Mar 16 12:57:15 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	P	L	D	G	I	N	V	L	D	F	T	H	V	Q	A	G	P	A	C	T	Q	M	M	G	F	L	G	A	N	V	I	K	I	E	R	R	G	S	G	D	M	T	R	G	W	L	Q	D	K	P	N	V	D	S	L	Y	F	T	M	F	N	C	N	K	R	S	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T									T	T												T	T									T	T	T		S	G	G	G	G	S	S		S	S	T	T	S							T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	D	M	K	T	P	E	G	K	E	L	L	E	Q	M	I	K	K	A	D	V	M	V	E	N	F	G	P	G	A	L	D	R	M	G	F	T	W	E	Y	I	Q	E	L	N	P	R	V	I	L	A	S	V	K	G	Y	A	E	G	H	A	N	E	H	L	K	V	Y	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S															S							S	T	T					T	T											T	T								S	S		T	T	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	Q	C	S	G	G	A	A	A	T	T	G	F	W	D	G	P	P	T	V	S	G	A	A	L	G	D	S	N	S	G	M	H	L	M	I	G	I	L	A	A	L	E	I	R	H	K	T	G	R	G	Q	K	V	A	V	A	M	Q	D	A	V	L	N	L	V	R	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T	T	S	S		T	T	S						S	S		T	T	T																						S																	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	R	D	Q	Q	R	L	E	R	T	G	I	L	A	E	Y	P	Q	A	Q	P	N	F	A	F	D	R	D	G	N	P	L	S	F	D	N	I	T	S	V	P	R	G	G	N	A	G	G	G	G	Q	P	G	W	M	L	K	C	K	G	W	E	T	D	A	D	S	Y	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			T	T	S	G	G	G	S	T	T			B		T	T	S		B			G	G	G			S					T	T			T	T	S	S	S							T	T	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	T	I	A	A	N	M	W	P	Q	I	C	D	M	I	D	K	P	E	W	K	D	D	P	A	Y	N	T	F	E	G	R	V	D	K	L	M	D	I	F	S	F	I	E	T	K	F	A	D	K	D	K	F	E	V	T	E	W	A	A	Q	Y	G	I	P	C	G	P	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G								T	T		G	G	G	S	S		T	T	T	S	S					T	T	T											T	T	T	T	S												T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	M	K	E	L	A	H	D	P	S	L	Q	K	V	G	T	V	V	E	V	V	D	E	I	R	G	N	H	L	T	V	G	A	P	F	K	F	S	G	F	Q	P	E	I	T	R	A	P	L	L	G	E	H	T	D	E	V	L	K	E	L	G	L	D	D	A	K	I	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T							T	T	S							T	T	T									S	S			S	S											T	T	T	T								T	T
	.	.	.	.	.	.	.
Sequence	L	H	A	K	Q	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T

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PDB structure

FASTA sequence

Hidden Markov model

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