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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d2tbva_

Fold library idFoldSuperfamilyFamily
d2tbva_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesTombusviridae-like VP


Added to library: Tue Mar 16 12:58:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVTVTSHREYLTQVNNSSGFVVNGGIVGNSLQLNPSNGTLFSWLPALASNFDQYSFNSVVLDYVPLCGTT
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Known secondary structure (DSSP)






SSTTT

SSTT
SSS

TTS
SSGGGTTTSBSSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVGRVALYFDKDSQDPEPADRVELANFGVLKETAPWAEAMLRIPTDKVKRYCNDSATVDQKLIDLGQLGI
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Known secondary structure (DSSP)



B


S
TTS



STT
TT


B
SSS








SSS

S
TTTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence ATYGGAGADAVGELFLARSVTLYFPQPTNTLLSSKRLDLTGSLADATGPGYLVLTRTPTVLTHTFRATGT
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Known secondary structure (DSSP) S
SSS


B




SSB
B
SSSS


B
S

S

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNLSGGLRCLTSLTLGATGAVVINDILAIDNVGTASDYFLNCTVSSLPATVTFTVSGVAAGILLVGRARA
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Known secondary structure (DSSP)
SS

S


SSS

STT
S






S
 ......
Sequence NVVNLL
Predicted secondary structure


SS confidence





Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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