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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d2qall1 | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like |
Added to library: Tue Mar 16 14:13:08 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | T | V | N | Q | L | V | R | K | P | R | A | R | K | V | A | K | S | N | V | P | A | L | E | A | C | P | Q | K | R | G | V | C | T | R | V | Y | T | T | T | P | K | K | P | N | S | A | L | R | K | V | C | R | V | R | L | T | N | G | F | E | V | T | S | Y | I | G | G | E | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | B | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Sequence | H | N | L | Q | E | H | S | V | I | L | I | R | G | G | R | V | K | D | L | P | G | V | R | Y | H | T | V | R | G | A | L | D | C | S | G | V | K | D | R | K | Q | A | R | S | K | Y | G | V | K | R | P | K | A | |||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | B | T | T | B | T | T | B | B | T | T | S | T | T | T | T | S | S | T | T | T | T |
Download: | PDB structure | FASTA sequence |
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