Fold library entry viewer: d2pgga1

Added to library: Tue Mar 16 14:24:56 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	I	P	K	V	W	V	P	P	E	D	P	L	A	S	P	S	R	L	A	K	F	L	R	E	N	G	Y	K	V	L	Q	P	R	S	L	P	E	N	E	E	Y	E	T	D	Q	I	L	P	D	L	A	W	M	R	Q	I	E	G	A	V	L	K	P	T	L	S	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										T	T		S											T	T			B																			G	G	G					S	S	T	T			S		S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	G	D	Q	E	Y	F	P	K	Y	Y	P	T	H	R	P	S	K	E	K	P	N	A	Y	P	P	D	I	A	L	L	K	Q	M	I	Y	L	F	L	Q	V	P	E	A	N	E	G	L	K	D	E	V	T	L	L	T	Q	N	I	R	D	K	A	Y	G	S	G	T	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S						B					S	S		S	S		T	T	S	S																	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Q	A	T	R	L	V	A	M	K	E	V	A	T	G	R	N	P	N	K	D	P	L	K	L	G	Y	T	F	E	S	I	A	Q	L	L	D	I	T	L	P	V	G	P	P	G	E	D	D	K	P	W	V	P	L	T	R	V	P	S	R	M	L	V	L	T	G	D	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S	S					G	G	G	T	T														S					S	S		S	S	S					B	T	S		G	G	G	G					S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	F	E	V	E	D	Y	L	P	K	I	N	L	K	S	S	S	G	L	P	Y	V	G	R	T	K	G	E	T	I	G	E	M	I	A	I	S	N	Q	F	L	R	E	L	S	T	L	L	K	Q	G	A	G	T	K	G	S	N	K	K	K	L	L	S	M	L	S	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												T	T	S	B			G	G	G	T	T		B	G	G	G	G																				T			S	S		S	S													T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	Y	L	S	C	G	L	L	F	P	K	A	E	R	Y	D	K	S	T	W	L	T	K	T	R	N	I	W	S	A	P	S	P	T	H	L	M	I	S	M	I	T	W	P	V	M	S	N	S	P	N	N	V	L	N	I	E	G	C	P	S	L	Y	K	F	N	P	F	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G													G	G	G	T	T	T																									T	T				S	T	T	T	S	T	T			B		T	T			S	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	L	N	R	I	V	E	W	I	L	A	P	E	E	P	K	A	L	V	Y	A	D	N	I	Y	I	V	H	S	N	T	W	Y	S	I	D	L	E	K	G	E	A	N	C	T	R	Q	H	M	Q	A	A	M	Y	Y	I	L	T	R	G	W	S	D	N	G	D	P	M	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S			S						T	T							T	T								T	T	G	G	G	G																		S			T	T				B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	T	W	A	T	F	A	M	N	I	A	P	A	L	V	V	D	S	S	C	L	I	M	N	L	Q	I	K	T	Y	G	Q	G	S	G	N	A	A	T	F	I	N	N	H	L	L	S	T	L	V	L	D	Q	W	N	L	M	R	Q	P	R	P	D	S	E	E	F	K	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T						B	S						B	T							S	B		T	T	S	T	T																			T	T				T	T	S					T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	D	K	L	G	I	N	F	K	I	E	R	S	I	D	D	I	R	G	K	L	R	Q	L	V	L	L	A	Q	P	G	Y	L	S	G	G	V	E	P	E	Q	S	S	P	T	V	E	L	D	L	L	G	W	S	A	T	Y	S	K	D	L	G	I	Y	V	P	V	L	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T										S	S														S	B	T	T	B	B	S				S	S										T	T							T	T	T	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	R	L	F	C	S	A	A	Y	P	K	G	V	G	I	E	Q	A	Y	K	V	V	R	Y	E	A	L	R	L	V	G	G	W	N	Y	P	L	L	N	K	A	C	K	N	N	A	G	A	A	R	R	H	L	E	A	K	G	F	P	L	D	E	F	L	A	E	W	S	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																						T	G	G	G																					T	T	T							G	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	E	F	G	E	A	F	E	G	F	N	I	K	L	T	V	T	S	E	S	L	A	E	L	N	K	P	V	P	P	K	P	P	N	V	N	R	P	V	N	T	G	G	L	K	A	V	S	N	A	L	K	T	G	R	Y	R	N	E	A	G	L	S	G	L	V	L	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	G	G	G	T	G	G	G				S			S									S										S	S				T	T											T	S					T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
Sequence	A	R	S	R	L	Q	D	A	V	K	A	K	A	E	A	E	K	L	H	K	S	K	P	D	D	P	D	A	D	W	F	E	R	S	E	T	L	S	D	L	L	E	K	A	D	I	A	S	K	V	A	H	S	A	L	V	E	T	S	D	A	L	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		T	T																S		S		T	T	S																T	T		B		B	T	T	B

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PDB structure

FASTA sequence

Hidden Markov model

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