Fold library entry viewer: d2nnja1

Added to library: Tue Mar 16 14:20:42 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	P	P	G	P	T	P	L	P	I	I	G	N	M	L	Q	I	D	V	K	D	I	C	K	S	F	T	N	F	S	K	V	Y	G	P	V	F	T	V	Y	F	G	M	N	P	I	V	V	F	H	G	Y	E	A	V	K	E	A	L	I	D	N	G	E	E	F	S	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	T	T	T	B	T	G	G	G	S		T	T															S							T	T								S									T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	S	P	I	S	Q	R	I	T	K	G	L	G	I	I	S	S	N	G	K	R	W	K	E	I	R	R	F	S	L	T	T	L	R	N	F	G	M	G	K	R	S	I	E	D	R	V	Q	E	E	A	H	C	L	V	E	E	L	R	K	T	K	A	S	P	C	D	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T		T	T	T	S																	T	S	T	T	T	T	S	S	S																			T	T	T	T			B		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	I	L	G	C	A	P	C	N	V	I	C	S	V	V	F	Q	K	R	F	D	Y	K	D	Q	N	F	L	T	L	M	K	R	F	N	E	N	F	R	I	L	N	S	P	W	I	Q	V	C	N	N	F	P	L	L	I	D	C	F	P	G	T	H	N	K	V	L	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S				T	T																			T	S	T								S	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	L	T	R	S	Y	I	R	E	K	V	K	E	H	Q	A	S	L	D	V	N	N	P	R	D	F	I	D	C	F	L	I	K	M	E	Q	E	K	D	N	Q	K	S	E	F	N	I	E	N	L	V	G	T	V	A	D	L	F	V	A	G	T	E	T	T	S	T	T	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T			T	T	S			S												T	S	S		S	S		S		S																S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	G	L	L	L	L	L	K	H	P	E	V	T	A	K	V	Q	E	E	I	D	H	V	I	G	R	H	R	S	P	C	M	Q	D	R	S	H	M	P	Y	T	D	A	V	V	H	E	I	Q	R	Y	S	D	L	V	P	T	G	V	P	H	A	V	T	T	D	T	K	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T		S	S	S				G	G	G	G	G	G																	S		T	T		S					S	S					T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Y	L	I	P	K	G	T	T	I	M	A	L	L	T	S	V	L	H	D	D	K	E	F	P	N	P	N	I	F	D	P	G	H	F	L	D	K	N	G	N	F	K	K	S	D	Y	F	M	P	F	S	A	G	K	R	I	C	A	G	E	G	L	A	R	M	E	L	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T												T		T	T	T	S	S	S	T	T	S			G	G	G	G	B		T	T	S		B				T	T			T	T			G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Sequence	F	L	T	T	I	L	Q	N	F	N	L	K	S	V	D	D	L	K	N	L	N	T	T	A	V	T	K	G	I	V	S	L	P	P	S	Y	Q	I	C	F	I	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		G	G	G				S		S			S	S	S								B

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PDB structure

FASTA sequence

Hidden Markov model

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