Fold library entry viewer: d2nlza1

Added to library: Tue Mar 16 14:21:59 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	M	F	D	P	Q	S	Y	P	Y	P	S	R	R	N	V	V	Y	A	K	N	G	M	V	A	T	S	Q	P	L	A	A	Q	A	G	L	D	I	L	K	A	G	G	N	A	I	D	A	A	I	A	T	A	T	A	L	T	V	L	E	P	T	S	N	G	I	G	S	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S				S										S	S						S	S													T	T																			T	T	S			T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	A	L	V	W	T	K	G	K	L	H	G	L	N	G	S	G	R	A	P	M	S	L	T	M	E	A	V	K	A	K	G	Y	E	Q	E	L	P	P	Y	G	V	I	P	V	T	V	P	G	A	P	G	A	W	A	E	L	A	K	M	Y	G	N	L	P	L	A	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T													T	T								T	T	T			S	S			S	S	S	S	T	T																			S	S						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	P	A	I	R	Y	A	E	E	G	Y	P	V	T	P	T	L	A	K	Y	W	K	A	A	Y	D	R	V	K	T	E	W	T	D	D	V	Y	Q	P	W	F	D	T	F	A	P	K	G	R	A	P	R	V	G	E	V	W	R	S	Q	G	H	A	D	T	L	R	S	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		S	S	T	T									T	T	S	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	S	N	G	E	S	F	Y	R	G	E	L	A	D	Q	I	H	A	F	F	D	K	H	G	G	Y	L	T	K	E	D	L	A	C	Y	R	P	E	W	V	E	P	I	S	I	D	Y	R	G	Y	R	V	W	E	I	P	P	N	G	Q	G	L	V	A	L	E	A	L	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T						S													T	T										T														T	T								T	T	B	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	K	G	F	E	F	Y	H	K	D	T	V	D	T	Y	H	K	Q	I	E	A	M	K	L	A	F	V	D	G	M	K	Y	V	T	E	P	S	D	M	S	V	S	V	E	Q	L	L	S	D	E	Y	A	T	E	R	R	K	E	I	G	E	Q	A	L	T	P	E	P	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S		S	S	S																							S	S	G	G	G		S	S						T										T	T			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	T	V	Y	L	A	T	A	D	G	D	G	N	M	V	S	F	I	Q	S	N	Y	M	G	F	G	S	G	V	V	V	P	G	T	G	I	A	M	Q	N	R	G	H	N	F	S	L	D	P	N	H	D	N	A	L	K	P	G	K	R	T	Y	H	T	I	I	P	G	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S										S	S	T	T		S	S				T	T	T	T			B			G	G	G	G	S	B			T	T	S	T	T	B			T	T					B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	K	N	D	Q	P	I	G	P	F	G	V	M	G	G	F	M	Q	P	Q	G	H	M	Q	V	M	M	N	T	I	D	F	G	L	N	P	Q	A	A	L	D	A	P	R	W	Q	W	T	N	G	K	Q	V	Q	V	E	P	T	F	P	V	D	I	A	Q	A	L	V	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										S	G	G	G														T	T										S							S	S	S						T	T	S											T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Sequence	G	H	K	I	Q	V	V	L	D	E	G	A	F	G	R	G	Q	I	I	W	R	D	P	T	T	G	V	L	A	G	G	T	E	P	R	T	D	G	Q	V	A	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T	T	T										T	T	T									T	T	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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