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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d2j12a1 | Virus attachment protein globular domain | Virus attachment protein globular domain | Adenovirus fiber protein "knob" domain |
Added to library: Tue Mar 16 12:39:29 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | R | T | L | W | T | T | P | D | T | S | P | N | C | T | I | A | Q | D | K | D | S | K | L | T | L | V | L | T | K | C | G | S | Q | I | L | A | N | V | S | L | I | V | V | A | G | K | Y | H | I | I | N | N | K | T | N | P | K | I | K | S | F | T | I | K | L | L | F | N | K | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | T | T | S | B | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | S | ![]() | ![]() | ![]() | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | V | L | L | D | N | S | N | L | G | K | A | Y | W | N | F | R | S | G | N | S | N | V | S | T | A | Y | E | K | A | I | G | F | M | P | N | L | V | A | Y | P | K | P | S | N | S | K | K | Y | A | R | D | I | V | Y | G | T | I | Y | L | G | G | K | P | D | Q | P | A | V | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | B | T | T | S | S | B | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | S | G | G | G | S | B | T | T | T | S | S | S | S | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B | T | T | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Sequence | K | T | T | F | N | Q | E | T | G | C | E | Y | S | I | T | F | N | F | S | W | S | K | T | Y | E | N | V | E | F | E | T | T | S | F | T | F | S | Y | I | A | Q | E | ||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | B | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B |
Download: | PDB structure | FASTA sequence |
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