PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d2h6ma1

Fold library id	Fold	Superfamily	Family
d2h6ma1	Trypsin-like serine proteases	Trypsin-like serine proteases	Viral cysteine protease of trypsin fold

Links to external resources
Added to library: Tue Mar 16 12:59:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S T L E I A G L V R K N L V Q F G V G E K N G S V R W V M N A L G V K D D W L L V P S H A Y K F E K D Y E M M E F Y F N R G G T Y Y S I S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B T G G G T T T S T T G G G S T T G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G N V V I Q S L D V G F Q D V V L M K V P T I P K F R D I T Q H F I K K G D V P R A L N R L A T L V T T V N G T P M L I S E G P L K M E E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S S S S S
S
T T S
B
G G G B
G G G G G G G T T S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T Y V H K K N D G T T V D L T V D Q A W R G K G E G L P G M C G G A L V S S N Q S I Q N A I L G I H V A G G N S I L V A K L V T Q E M F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
T T
S
G G G T T
T T
G G G G G

. .

Sequence N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	L	E	I	A	G	L	V	R	K	N	L	V	Q	F	G	V	G	E	K	N	G	S	V	R	W	V	M	N	A	L	G	V	K	D	D	W	L	L	V	P	S	H	A	Y	K	F	E	K	D	Y	E	M	M	E	F	Y	F	N	R	G	G	T	Y	Y	S	I	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	S													B	T						G	G	G	T	T	T	S	T	T	G	G	G	S							T	T							G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	V	V	I	Q	S	L	D	V	G	F	Q	D	V	V	L	M	K	V	P	T	I	P	K	F	R	D	I	T	Q	H	F	I	K	K	G	D	V	P	R	A	L	N	R	L	A	T	L	V	T	T	V	N	G	T	P	M	L	I	S	E	G	P	L	K	M	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S					S	S	S	S			S							T	T	S			B				G	G	G	B			G	G	G	G	G	G	G	T	T	S									T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	Y	V	H	K	K	N	D	G	T	T	V	D	L	T	V	D	Q	A	W	R	G	K	G	E	G	L	P	G	M	C	G	G	A	L	V	S	S	N	Q	S	I	Q	N	A	I	L	G	I	H	V	A	G	G	N	S	I	L	V	A	K	L	V	T	Q	E	M	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																			T	T		T	T						S		G	G	G	T	T											T	T									G	G	G	G	G
	.	.
Sequence	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G