Fold library entry viewer: d2guma1

Added to library: Tue Mar 16 13:54:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	N	F	Y	V	C	P	P	P	T	G	A	T	V	V	Q	F	E	Q	P	R	R	C	P	T	R	P	E	G	Q	N	Y	T	E	G	I	A	V	V	F	K	E	N	I	A	P	Y	K	F	K	A	T	M	Y	Y	K	D	V	T	V	S	Q	V	W	F	G	H	R	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S																				B												S																						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	F	M	G	I	F	E	D	R	A	P	V	P	F	E	E	V	I	D	K	I	N	A	K	G	V	C	R	S	T	A	K	Y	V	R	N	N	L	E	T	T	A	F	H	R	D	D	H	E	T	D	M	E	L	K	P	A	N	A	A	T	R	T	S	R	G	W	H	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T					S				S						S	S	S	S						G	G	G															T	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	L	K	Y	N	P	S	R	V	E	A	F	H	R	Y	G	T	T	V	N	C	I	V	E	E	V	D	A	R	S	V	Y	P	Y	D	E	F	V	L	A	T	G	D	F	V	Y	M	S	P	F	Y	G	Y	R	E	G	S	H	T	E	H	T	T	Y	A	A	D	R	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								T	T	S																				T	T		S					T	T	S					B		T	T			S	S	T	T	G	G	G	S		B		S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	V	D	G	F	Y	A	R	D	L	A	P	T	T	R	N	L	L	T	T	P	K	F	T	V	A	W	D	W	V	P	K	R	P	S	V	C	T	M	T	K	W	Q	E	V	D	E	M	L	R	S	E	Y	G	G	S	F	R	F	S	S	D	A	I	S	T	T	F	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S										S	T	T	T			S								S								T	T							T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	L	T	E	Y	P	L	S	R	V	D	L	G	D	C	I	G	K	D	A	R	D	A	M	D	R	I	F	A	R	R	Y	N	A	T	H	I	K	V	G	Q	P	Q	Y	Y	Q	A	N	G	G	F	L	I	A	Y	Q	P	L	L	S	N	T	V	E	R	I	K	T	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				G	G	G	B	T	T																				T	T	T	T	B				S	S							T	T	T										B				B						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	I	E	F	A	R	L	Q	F	T	Y	N	H	I	Q	R	H	V	N	D	M	L	G	R	V	A	I	A	W	C	E	L	Q	N	H	E	L	T	L	W	N	E	A	R	K	L	N	P	N	A	I	A	S	V	T	V	G	R	R	V	S	A	R	M	L	G	D	V	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																									S	S								S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	S	T	C	V	P	V	A	A	D	N	V	I	V	Q	N	S	M	R	I	S	S	R	P	G	A	C	Y	S	R	P	L	V	S	F	R	Y	E	D	Q	G	P	L	V	E	G	Q	L	G	E	N	N	E	L	R	L	T	R	D	A	I	E	P	C	T	V	G	H	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G					S	B		B		T	T	S	T	T				S	S							S	S	T	T	S									S	T	T				S										S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	F	T	F	G	G	G	Y	V	Y	F	E	E	Y	A	Y	S	H	Q	L	S	R	A	D	I	T	T	V	S	T	F	I	D	L	N	I	T	M	L	E	D	H	E	F	V	P	L	E	V	Y	T	R	H	E	I	K	D	S	G	L	L	D	Y	T	E	V	Q	R	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T							T	T								G	G	G	S																								S	S									S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Sequence	Q	L	H	D	L	R	F	A	D	I	D	T	V	I	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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