Fold library entry viewer: d2gj4a1

Added to library: Tue Mar 16 13:48:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	I	S	V	R	G	L	A	G	V	E	N	V	T	E	L	K	K	N	F	N	R	H	L	H	F	T	L	V	K	D	R	N	V	A	T	P	R	D	Y	Y	F	A	L	A	H	T	V	R	D	H	L	V	G	R	W	I	R	T	Q	Q	H	Y	Y	E	K	D	P	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																						T	T				T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	Y	Y	L	S	L	E	F	Y	M	G	R	T	L	Q	N	T	M	V	N	L	A	L	E	N	A	C	D	E	A	T	Y	Q	L	G	L	D	M	E	E	L	E	E	I	E	E	D	A	G	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	M	A	T	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																T												T	T								T	T	S								S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	A	A	Y	G	Y	G	I	R	Y	E	F	G	I	F	N	Q	K	I	C	G	G	W	Q	M	E	E	A	D	D	W	L	R	Y	G	N	P	W	E	K	A	R	P	E	F	T	L	P	V	H	F	Y	G	R	V	E	H	T	S	Q	G	A	K	W	V	D	T	Q	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	B		S							T	T									T	T	T	T			T	T					G	G	G							S							S	S	S					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	M	P	Y	D	T	P	V	P	G	Y	R	N	N	V	V	N	T	M	R	L	W	S	A	K	A	P	N	G	Y	I	Q	A	V	L	D	R	N	L	A	E	N	I	S	R	V	L	Y	P	N	D	N	F	F	E	G	K	E	L	R	L	K	Q	E	Y	F	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S	S																						T						G	G	G	S	B					S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	T	L	Q	D	I	I	R	R	F	K	S	N	F	D	A	F	P	D	K	V	A	I	Q	L	N	D	T	H	P	S	L	A	I	P	E	L	M	R	V	L	V	D	L	E	R	L	D	W	D	K	A	W	E	V	T	V	K	T	C	A	Y	T	N	H	T	V	L	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														G	G	G											S	S	T	T	T	T												T	S																								G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	L	E	R	W	P	V	H	L	L	E	T	L	L	P	R	H	L	Q	I	I	Y	E	I	N	Q	R	F	L	N	R	V	A	A	A	F	P	G	D	V	D	R	L	R	R	M	S	L	V	E	E	G	A	V	K	R	I	N	M	A	H	L	C	I	A	G	S	H	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																																		S	T	T										S				S	S	S												T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	G	V	A	R	I	H	S	E	I	L	K	K	T	I	F	K	D	F	Y	E	L	E	P	H	K	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	V	L	C	N	P	G	L	A	E	I	I	A	E	R	I	G	E	E	Y	I	S	D	L	D	Q	L	R	K	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										T	T	T								G	G	G								B		T							T														S	G	G	G	G		G	G	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	Y	V	D	D	E	A	F	I	R	D	V	A	K	V	K	Q	E	N	K	L	K	F	A	A	Y	L	E	R	E	Y	K	V	H	I	N	P	N	S	L	F	D	V	Q	V	K	R	I	H	E	Y	K	R	Q	L	L	N	C	L	H	V	I	T	L	Y	N	R	I	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T																																	T	T	S							S				G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	P	N	K	F	V	V	P	R	T	V	M	I	G	G	K	A	A	P	G	Y	H	M	A	K	M	I	I	K	L	I	T	A	I	G	D	V	V	N	H	D	P	V	V	G	D	R	L	R	V	I	F	L	E	N	Y	R	V	S	L	A	E	K	V	I	P	A	A	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S															T	T																			T	T		T	T	T	G	G	G							T	T										G	G	G		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	E	Q	I	S	T	A	G	T	E	A	S	G	T	G	N	M	K	F	M	L	N	G	A	L	T	I	G	T	M	D	G	A	N	V	E	M	A	E	E	A	G	E	E	N	F	F	I	F	G	M	R	V	E	D	V	D	R	L	D	Q	R	G	Y	N	A	Q	E	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		S			S								T	T							S		T	T										G	G	G	S				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	R	I	P	E	L	R	Q	I	I	E	Q	L	S	S	G	F	F	S	P	K	Q	P	D	L	F	K	D	I	V	N	M	L	M	H	H	D	R	F	K	V	F	A	D	Y	E	E	Y	V	K	C	Q	E	R	V	S	A	L	Y	K	N	P	R	E	W	T	R	M	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T		T	T	S	T	T	T	T												T	T		T	G	G	G																T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
Sequence	R	N	I	A	T	S	G	K	F	S	S	D	R	T	I	A	Q	Y	A	R	E	I	W	G	V	E	P	S	R	Q	R	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		G	G	G	B												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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