Fold library entry viewer: d2gica1

Added to library: Tue Mar 16 14:34:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	T	V	K	R	I	I	D	N	T	V	I	V	P	K	L	P	A	N	E	D	P	V	E	Y	P	A	D	Y	F	R	K	S	K	E	I	P	L	Y	I	N	T	T	K	S	L	S	D	L	R	G	Y	V	Y	Q	G	L	K	S	G	N	V	S	I	I	H	V	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																	S	G	G	G	T	T	T		S																								T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	Y	G	A	L	K	D	I	R	G	K	L	D	K	D	W	S	S	F	G	I	N	I	G	K	A	G	D	T	I	G	I	F	D	L	V	S	L	K	A	L	D	G	V	L	P	D	G	V	S	D	A	S	R	T	S	A	D	D	K	W	L	P	L	Y	L	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T						B		S	S					T	T						T	T		B			T	T		S							S			S	S		S				T	T			S		T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	R	V	G	R	T	Q	M	P	E	Y	R	K	K	L	M	D	G	L	T	N	Q	C	K	M	I	N	E	Q	F	E	P	L	V	P	E	G	R	D	I	F	D	V	W	G	N	D	S	N	Y	T	K	I	V	A	A	V	D	M	F	F	H	M	F	K	K	H	E	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			S	T														T	T	T	T							S				S	S	S	S	S	T	T	G	G	G																			T	T	S	T	T	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	F	R	Y	G	T	I	V	S	R	F	K	D	C	A	A	L	A	T	F	G	H	L	C	K	I	T	G	M	S	T	E	D	V	T	T	W	I	L	N	R	E	V	A	D	E	M	V	Q	M	M	L	P	G	Q	E	I	D	K	A	D	S	Y	M	P	Y	L	I	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G					G	G	G	T	T	T	T															T									T			S											T		S	S	S		T	T		T	T		S	G	G	G	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	L	S	S	K	S	P	Y	S	S	V	K	N	P	A	F	H	F	W	G	Q	L	T	A	L	L	L	R	S	T	R	A	R	N	A	R	Q	P	D	D	I	E	Y	T	S	L	T	T	A	G	L	L	Y	A	Y	A	V	G	S	S	A	D	L	A	Q	Q	F	C	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		S	S		T	T	S	S	T	T															T	T		S	S	G	G	G		B			S	S	S																			S									S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	N	K	Y	T	P	D	D	S	T	G	G	L	T	T	N	A	P	P	Q	G	R	D	V	V	E	W	L	G	W	F	E	D	Q	N	R	K	P	T	P	D	M	M	Q	Y	A	K	R	A	V	M	S	L	Q	G	L	R	E	K	T	I	G	K	Y	A	K	S	E	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S				S			S	S				S	S												T	T	T	T	S														T	T			S			T	T	B
	.
Sequence	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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