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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d2ft1a1

Fold library idFoldSuperfamilyFamily
d2ft1a1Major capsid protein gp5Major capsid protein gp5Major capsid protein gp5


Added to library: Tue Mar 16 13:42:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLGSDADSAGSLIQPMQIPGIIMPGLRRLTIRDLLAQGRTSSNALEYVREEVFTNNADVVAEKALKPESD
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Known secondary structure (DSSP)


SSTTTGGGG






S









SGGGS

SS






TT





 .........80.........90.........100.........110.........120.........130.........140
Sequence ITFSKQTANVKTIAHWVQASRQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVATAY
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Known secondary structure (DSSP)
STTS

SSTTS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTSLNATGDTRADIIAHAIYQVTESEFSASGIVLNPRDWHNIALLKDNEGRYIFGGPQAFTSNIMWGLPV
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Known secondary structure (DSSP)
GGG

SS

TTS




T
B
TTS
BSSSTTT



STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPTKAQAAGTFTVGGFDMASQVWDRMDATVEVSREDRDNFVKNMLTILCEERLALAHYRPTAIIKGTFSS
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Known secondary structure (DSSP)
TTS
TT
SSSSTTT
S
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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