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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d2bbvc_

Fold library idFoldSuperfamilyFamily
d2bbvc_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesNodaviridae-like VP


Added to library: Tue Mar 16 13:55:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQTAPVPQQNVPALTRLSQPGLAFLKCAFAPPDFNTDPGKGIPDRFEGKVVTRKDVLNQSINFTANRDTF
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Known secondary structure (DSSP)














SS

GGG
SS






SS



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILIAPTPGVAYWVADVPAGTFPISTTTFNAVNFPGFNSMFGNAAASRSDQVSSFRYASMNVGIYPTSNLM
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Known secondary structure (DSSP)


TTTT



TT

TT
SSTT
TTSS
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QFAGSITVWKCPVKLSNVQFPVATTPATSALVHTLVGLDGVLAVGPDNFSESFIKGVFSQSVCNEPDFEF
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Known secondary structure (DSSP) T







TT

SGGGGGS

SS
GGG


BSSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence SDILEGIQTLPPANVTVATSGQPFNLAAGAEAVSGIVGWGNMDTIVIRVSAPTGAVNSAILKTWACLEYR
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Known secondary structure (DSSP)

SS

S
TTS
TTTTT
SS


TTT






SB

TT

 .........290.........300.........310.........320.
Sequence PNPNAMLYQFGHDSPPCDEVALQEYRTVARSLPVAVIAAQN
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Known secondary structure (DSSP)
TTSGGGGG





SS
S
B
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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