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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d2bbva_

Fold library idFoldSuperfamilyFamily
d2bbva_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesNodaviridae-like VP


Added to library: Tue Mar 16 12:15:07 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LTRLSQPGLAFLKCAFAPPDFNTDPGKGIPDRFEGKVVTRKDVLNQSINFTANRDTFILIAPTPGVAYWV
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Known secondary structure (DSSP)
TTS

GGGSSS






SS

S
TT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADVPAGTFPISTTTFNAVNFPGFNSMFGNAAASRSDQVSSFRYASMNVGIYPTSNLMQFAGSITVWKCPV
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Known secondary structure (DSSP) TT



TT

TT
SSTT
STTTS


S
TTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence KLSNVQFPVATTPATSALVHTLVGLDGVLAVGPDNFSESFIKGVFSQSVCNEPDFEFSDILEGIQTLPPA
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Known secondary structure (DSSP)


SS

SGGGGGS

SS
GGG


B
SSS




SS
SS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NVTVATSGQPFNLAAGAEAVSGIVGWGNMDTIVIRVSAPTGAVNSAILKTWACLEYRPNPNAMLYQFGHD
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Known secondary structure (DSSP) T

T
SS

STTT






SB

TT


TTSSSGGG
 .........290.........300........
Sequence SPPCDEVALQEYRTVARSLPVAVIAAQN
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Known secondary structure (DSSP)




TS
S
B
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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