Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d2axto1

Fold library idFoldSuperfamilyFamily
d2axto1Transmembrane beta-barrelsOMPA-likePsbO-like


Added to library: Tue Mar 16 13:52:09 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTR
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


TTTTTTTS




TT



B


SSS




SS
S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFK
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) S



STT



SSS


SS

SB
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEFNVPSYRTANFLDPKGRGLASGYDSAIALPQAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAG
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

SS
TT
B
TTSBBSSSSBSS
TT
TTS
SGGGS






TTT
 .........220.........230.........240..
Sequence TFESEQLSDDDMGAHEPHEVKIQGVFYASIEP
Predicted secondary structure














SS confidence































Known secondary structure (DSSP) B

TTTTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D