Fold library entry viewer: d2ajfa1

Added to library: Tue Mar 16 12:17:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	I	E	E	Q	A	K	T	F	L	D	K	F	N	H	E	A	E	D	L	F	Y	Q	S	S	L	A	S	W	N	Y	N	T	N	I	T	E	E	N	V	Q	N	M	N	N	A	G	D	K	W	S	A	F	L	K	E	Q	S	T	L	A	Q	M	Y	P	L	Q	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			S																												T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	N	L	T	V	K	L	Q	L	Q	A	L	Q	Q	N	G	S	S	V	L	S	E	D	K	S	K	R	L	N	T	I	L	N	T	M	S	T	I	Y	S	T	G	K	V	C	N	P	D	N	P	Q	E	C	L	L	L	E	P	G	L	N	E	I	M	A	N	S	L	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T			G	G	G	G	S		T	T																								S	S		T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	E	R	L	W	A	W	E	S	W	R	S	E	V	G	K	Q	L	R	P	L	Y	E	E	Y	V	V	L	K	N	E	M	A	R	A	N	H	Y	E	D	Y	G	D	Y	W	R	G	D	Y	E	V	N	G	V	D	G	Y	D	Y	S	R	G	Q	L	I	E	D	V	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T																						T	T		S	S							G	G	G		B		S	S	T	T	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	F	E	E	I	K	P	L	Y	E	H	L	H	A	Y	V	R	A	K	L	M	N	A	Y	P	S	Y	I	S	P	I	G	C	L	P	A	H	L	L	G	D	M	W	G	R	F	W	T	N	L	Y	S	L	T	V	P	F	G	Q	K	P	N	I	D	V	T	D	A	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	T	T	S			T	T	B				G	G	G	S	S	S	S	S	S	S			G	G	G						T	T	T	T	S										G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	Q	A	W	D	A	Q	R	I	F	K	E	A	E	K	F	F	V	S	V	G	L	P	N	M	T	Q	G	F	W	E	N	S	M	L	T	D	P	G	N	V	Q	K	A	V	C	H	P	T	A	W	D	L	G	K	G	D	F	R	I	L	M	C	T	K	V	T	M	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T																T	T	T													B		S				S	S	S													T	T										S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	L	T	A	H	H	E	M	G	H	I	Q	Y	D	M	A	Y	A	A	Q	P	F	L	L	R	N	G	A	N	E	G	F	H	E	A	V	G	E	I	M	S	L	S	A	A	T	P	K	H	L	K	S	I	G	L	L	S	P	D	F	Q	E	D	N	E	T	E	I	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	S	S		G	G	G		S		S	S	T	T														T	S							T	T	S	S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	L	K	Q	A	L	T	I	V	G	T	L	P	F	T	Y	M	L	E	K	W	R	W	M	V	F	K	G	E	I	P	K	D	Q	W	M	K	K	W	W	E	M	K	R	E	I	V	G	V	V	E	P	V	P	H	D	E	T	Y	C	D	P	A	S	L	F	H	V	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T																		T		S		G	G	G												T	T					S	S				T	T			G	G	G	G	S					T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	Y	S	F	I	R	Y	Y	T	R	T	L	Y	Q	F	Q	F	Q	E	A	L	C	Q	A	A	K	H	E	G	P	L	H	K	C	D	I	S	N	S	T	E	A	G	Q	K	L	F	N	M	L	R	L	G	K	S	E	P	W	T	L	A	L	E	N	V	V	G	A	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				T																				T	T			S		G	G	G				T	T													T	T	G	G	G	S								T	T	S	S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Sequence	M	N	V	R	P	L	L	N	Y	F	E	P	L	F	T	W	L	K	D	Q	N	K	N	S	F	V	G	W	S	T	D	W	S	P	Y	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							T											G	G	G	S			S		B	S	S			S	S

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PDB structure

FASTA sequence

Hidden Markov model

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