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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d2aepa1

Fold library idFoldSuperfamilyFamily
d2aepa16-bladed beta-propellerSialidasesSialidases (neuraminidases)


Added to library: Tue Mar 16 13:30:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDR
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Known secondary structure (DSSP)





S
B


S

TTS


SS
SSSGGGTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPYRTLLMNELGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKI
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Known secondary structure (DSSP)
TT
TT



TT

S
SS
S
TTS
TT
SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRTQESECVCINGTCTVVMTDGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCYPRYPGVRCVCR
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Known secondary structure (DSSP)
B

SS

TT
SSS
TT

SS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DNWKGSNRPIVDINVKDYSIVSSYVCSGLVGDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWM
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Known secondary structure (DSSP)

SS
SS

TTT




SS


SS


TTT



SSS


SS
SS




TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVDRGNRSGYSGIFSVEGKSCINRCFYVELIRGRKQ
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Known secondary structure (DSSP)
SSSSSSTTTTTSTT






SSSTTT
 .........360.........370.........380.......
Sequence ETEVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI
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Known secondary structure (DSSP)
TTSS
SS











GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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