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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1zupa1

Fold library idFoldSuperfamilyFamily
d1zupa1Ribonuclease H-like motifRibonuclease H-likeTM1739-like


Added to library: Tue Mar 16 13:30:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XQVRIERAERIESELEEHVGDQTFVEESRFLEEDEQREGEILDQIIFVDGKRRSFVRITTDEGITGIFAE
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Known secondary structure (DSSP)




S






SS






B

SS

B
TT








S
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LCVGAVIWDREGGTKTLFSPDKPPVKERVLGFSQSFQEEGYEEVGGILFKVVKEGKDAXQSIDLYXRSLE
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Known secondary structure (DSSP) TTTS
BTTB



TT



STT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEEVRKHXDKNILIVKDGPAARELPFEENVGPIGLVKNIGVTELSKEDFKKLRFLKKGKRSKXFVSSLKK
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Known secondary structure (DSSP) TTGGG


BS

TTS

BTTTB



SB

S
GGG

TT
B





 .........220.........230.........240.........250.........260.........270.........280
Sequence VGAYVKLIDGEGIRGLVRLETYVKDDNQIPYIRKVFDDLAKTLPHLTADLPNILPIQFLEENLSYYLTDK
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Known secondary structure (DSSP)
SSSSSSTTSSGGGGGGG






TS

 .........290.
Sequence NYXNTRLFAYI
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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