Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1zupa1

Fold library idFoldSuperfamilyFamily
d1zupa1Ribonuclease H-like motifRibonuclease H-likeTM1739-like


Added to library: Tue Mar 16 13:30:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XQVRIERAERIESELEEHVGDQTFVEESRFLEEDEQREGEILDQIIFVDGKRRSFVRITTDEGITGIFAE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)




S






SS






B

SS

B
TT








S
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LCVGAVIWDREGGTKTLFSPDKPPVKERVLGFSQSFQEEGYEEVGGILFKVVKEGKDAXQSIDLYXRSLE
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTTS
BTTB



TT



STT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEEVRKHXDKNILIVKDGPAARELPFEENVGPIGLVKNIGVTELSKEDFKKLRFLKKGKRSKXFVSSLKK
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TTGGG


BS

TTS

BTTTB



SB

S
GGG

TT
B





 .........220.........230.........240.........250.........260.........270.........280
Sequence VGAYVKLIDGEGIRGLVRLETYVKDDNQIPYIRKVFDDLAKTLPHLTADLPNILPIQFLEENLSYYLTDK
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)
SSSSSSTTSSGGGGGGG






TS

 .........290.
Sequence NYXNTRLFAYI
Predicted secondary structure





SS confidence










Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D