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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1y9ua_

Fold library idFoldSuperfamilyFamily
d1y9ua_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 13:20:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEVSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGV
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Known secondary structure (DSSP)
SS
GGGT


SS
GGG



STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDLKLDSFRYGDLADPKWKGKVCIRSGQHPYNT
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Known secondary structure (DSSP)



S
GGGB
GGGS
TT





BGGGGG
GGGTT



TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALVAAMIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARK
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Known secondary structure (DSSP)
BSS
S
S
TTS
SS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence WGDAIKVVRPTFAGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVV
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Known secondary structure (DSSP) T

B



B
TT
TTTSTT
SSTT



 .........290.........300.........310....
Sequence ASFGPLKVDTLPVAEIAKYRKQASELVDKVGFDN
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Known secondary structure (DSSP) T



B

S
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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