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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1y4ta_

Fold library idFoldSuperfamilyFamily
d1y4ta_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 14:20:44 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SELNIYSARHYNADFEIIKKFEEKTGIKVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLG
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Known secondary structure (DSSP)





T




GGG



SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATA
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Known secondary structure (DSSP)




S
GGGB
TTSS
TTS



TT

SGGGGG
GGGTT



TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYSKTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPK
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Known secondary structure (DSSP)
BSSS

SSTS
ST
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVEL
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Known secondary structure (DSSP) T
TTTTTT
B
TT
S
TS

SSTTS

 .........290.........300.........310.......
Sequence SQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
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Known secondary structure (DSSP)




B

S
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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