Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1xvxa_

Fold library idFoldSuperfamilyFamily
d1xvxa_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 13:18:18 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNDSGIVVYNAQHENLVKSWVDGFTKDTGIKVTLRNGGDSELGNQLVQEGSASPADVFLTENSPAMVLVD
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S

S





GGG


SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NAKLFAPLDAVTQAQVAQEYRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAASPS
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT
B



B
GGGS
SSSS

TTTS
GGGS
SSGGGGGSGGGTTS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GADFQAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKTGENS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S

SSTTSSSTTTT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITGKSGQDILRTNNAFEYAVGVDAASNPKL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TT



TT
GGG
BTT
SSSSSS

B

BTT



TTS
 .........290.........300.........310.
Sequence VPLKDLDAPKVEPSKLNSKKVVELMTEAGLL
Predicted secondary structure














SS confidence






























Known secondary structure (DSSP)

GGGS





GGG

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D