PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1wuua1

Fold library id	Fold	Superfamily	Family
d1wuua1	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	GHMP Kinase, N-terminal domain

Links to external resources
Added to library: Tue Mar 16 12:31:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A A L R Q P Q V A E L L A E A R R A F R E E F G A E P E L A V S A P G R V N L I G E H T D Y N Q G L V L P X A L E L X T V L V G S P R K D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T
G G G T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L V S L L T T S E G A D E P Q R L Q F P L P T A Q R S L E P G T P R W A N Y V K G V I Q Y Y P A A P L P G F S A V V V S S V P L G G G L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
S
S S
S S G G G
S S S
S
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S A S L E V A T Y T F L Q Q L C P D S G T I A A R A Q V C Q Q A E H S F A G X P C G I X D Q F I S L X G Q K G H A L L I D C R S L E T S L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T
S
T T T T T

. . . . .

Sequence P L S D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	L	R	Q	P	Q	V	A	E	L	L	A	E	A	R	R	A	F	R	E	E	F	G	A	E	P	E	L	A	V	S	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	Q	G	L	V	L	P	X	A	L	E	L	X	T	V	L	V	G	S	P	R	K	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S			S														T	T		G	G	G	T																				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	S	L	L	T	T	S	E	G	A	D	E	P	Q	R	L	Q	F	P	L	P	T	A	Q	R	S	L	E	P	G	T	P	R	W	A	N	Y	V	K	G	V	I	Q	Y	Y	P	A	A	P	L	P	G	F	S	A	V	V	V	S	S	V	P	L	G	G	G	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S		S		S									S	S							S	S	G	G	G											S	S	S													S		T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	S	L	E	V	A	T	Y	T	F	L	Q	Q	L	C	P	D	S	G	T	I	A	A	R	A	Q	V	C	Q	Q	A	E	H	S	F	A	G	X	P	C	G	I	X	D	Q	F	I	S	L	X	G	Q	K	G	H	A	L	L	I	D	C	R	S	L	E	T	S	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S				S																	T						S											T	T							T	T	T
	.	.	.	.	.
Sequence	P	L	S	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)