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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1w9ca_

Fold library idFoldSuperfamilyFamily
d1w9ca_alpha-alpha superhelixARM repeatExportin HEAT-like repeat


Added to library: Tue Mar 16 14:37:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIQLGRIYLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENF
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Known secondary structure (DSSP)



GGG
SGGGGSTT
S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRT
Predicted secondary structure


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Known secondary structure (DSSP) TS
GGG

TGGGGGGGSSTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQ
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Known secondary structure (DSSP)
TTS
TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAF
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Known secondary structure (DSSP) SSS

TTTT


S
S
SSS



 .........290.........300.........310.........320.
Sequence PHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAG
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Known secondary structure (DSSP) TTS
TTT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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