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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1w85a_

Fold library idFoldSuperfamilyFamily
d1w85a_Thiamin diphosphate-binding fold (THDP-binding)Thiamin diphosphate-binding fold (THDP-binding)Branched-chain alpha-keto acid dehydrogenase PP module


Added to library: Tue Mar 16 12:37:26 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG
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Known secondary structure (DSSP)




T


SB
TTS
BS
GGG




TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQII
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Known secondary structure (DSSP) S



TT
T

TT


SS
TT

T
GGGG


TT

B




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQ
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Known secondary structure (DSSP) TTTT
S

TGGGGSTT


STTGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDSKELENE
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Known secondary structure (DSSP)
S
S
SGGGGGGTT

TT
TTS




SS
S
SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence WAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQY
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Known secondary structure (DSSP) TT
TT


TS



TS
SS

 ........
Sequence EIYKEKES
Predicted secondary structure

SS confidence







Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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