Fold library entry viewer: d1vnsa_

Added to library: Tue Mar 16 13:28:36 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	T	P	I	P	L	P	K	I	D	E	P	E	E	Y	N	T	N	Y	I	L	F	W	N	H	V	G	L	E	L	N	R	V	T	H	T	V	G	G	P	L	T	G	P	P	L	S	A	R	A	L	G	M	L	H	L	A	I	H	D	A	Y	F	S	I	C	P	P	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		G	G	G	G	G	S																				T		S	S		S																							S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	T	T	F	L	S	P	D	T	E	N	A	A	Y	R	L	P	S	P	N	G	A	N	D	A	R	Q	A	V	A	G	A	A	L	K	M	L	S	S	L	Y	M	K	P	V	E	Q	P	N	P	N	P	G	A	N	I	S	D	N	A	Y	A	Q	L	G	L	V	L	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	S	B	T	T		S	S	G	G	G	B					T	T																					S			T	T	T	T	T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	L	E	A	P	G	G	V	D	R	E	S	A	S	F	M	F	G	E	D	V	A	D	V	F	F	A	L	L	N	D	P	R	G	A	S	Q	E	G	Y	H	P	T	P	G	R	Y	K	F	D	D	E	P	T	H	P	V	V	L	I	P	V	D	P	N	N	P	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T				T	T	S																				T	T	T	T			T	T						S	T	T	B					T	T	S	S						S	S	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	K	M	P	F	R	Q	Y	H	A	P	F	Y	G	K	T	T	K	R	F	A	T	Q	S	E	H	F	L	A	D	P	P	G	L	R	S	N	A	D	E	T	A	E	Y	D	D	A	V	R	V	A	I	A	M	G	G	A	Q	A	L	N	S	T	K	R	S	P	W	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T					S			S	S		S	S								T	T	S	G	G	G	T	T																	B		T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Q	G	L	Y	W	A	Y	D	G	S	N	L	I	G	T	P	P	R	F	Y	N	Q	I	V	R	R	I	A	V	T	Y	K	K	E	E	D	L	A	N	S	E	V	N	N	A	D	F	A	R	L	F	A	L	V	D	V	A	C	T	D	A	G	I	F	S	W	K	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T				S	B	T	T	T	B																	T		S	S	S		S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	E	F	E	F	W	R	P	L	S	G	V	R	D	D	G	R	P	D	H	G	D	P	F	W	L	T	L	G	A	P	A	T	N	T	N	D	I	P	F	K	P	P	F	P	A	Y	P	S	G	H	A	T	F	G	G	A	V	F	Q	M	V	R	R	Y	Y	N	G	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B									T				T	T	T			T	T			B			B			T	T	S	S				B			S	S			S	S																			B	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	W	K	D	D	E	P	D	N	I	A	I	D	M	M	I	S	E	E	L	N	G	V	N	R	D	L	R	Q	P	Y	D	P	T	A	P	I	E	D	Q	P	G	I	V	R	T	R	I	V	R	H	F	D	S	A	W	E	L	M	F	E	N	A	I	S	R	I	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B				T	T	S												G	G	G	S	S	S					S	S				T	T	S		G	G	G	S													S																T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	V	H	W	R	F	D	A	A	A	A	R	D	I	L	I	P	T	T	T	K	D	V	Y	A	V	D	N	N	G	A	T	V	F	Q	N	V	E	D	I	R	Y	T	T	R	G	T	R	E	D	E	E	G	L	F	P	I	G	G	V	P	L	G	I	E	I	A	D	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S						S						B		B		S	S	T	T		B		B		T	T	S		B		B			G	G	G										S	S	S	S	S					S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Sequence	F	N	N	G	L	K	P	T	P	P	E	I	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S					G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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