Fold library entry viewer: d1vlba4

Added to library: Tue Mar 16 12:21:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	G	P	A	A	A	A	E	D	A	I	E	I	H	P	G	T	P	N	V	Y	F	E	Q	P	I	V	K	G	E	D	T	G	P	I	F	A	S	A	D	V	T	V	E	G	D	F	Y	V	G	R	Q	P	H	M	P	I	E	P	D	V	A	F	A	Y	M	G	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T				S	S	T	T	S		S										S	S										S																	S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	C	Y	I	H	S	K	S	I	G	V	H	L	H	L	Y	M	I	A	P	G	V	G	L	E	P	D	Q	L	V	L	V	A	N	P	M	G	G	T	F	G	Y	K	F	S	P	T	S	E	A	L	V	A	V	A	A	M	A	T	G	R	P	V	H	L	R	Y	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S		S														T			G	G	G									S			T	T	G	G	G	S		S	S												S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	Q	Q	Q	Q	Y	T	G	K	R	S	P	W	E	M	N	V	K	F	A	A	K	K	D	G	T	L	L	A	M	E	S	D	W	L	V	D	H	G	P	Y	S	E	F	G	D	L	L	T	L	R	G	A	Q	F	I	G	A	G	Y	N	I	P	N	I	R	G	L	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		B														T	T															T	T			T	T												T	T	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	V	A	T	N	H	V	W	G	S	A	F	R	G	Y	G	A	P	Q	S	M	F	A	S	E	C	L	M	D	M	L	A	E	K	L	G	M	D	P	L	E	L	R	Y	K	N	A	Y	R	P	G	D	T	N	P	T	G	Q	E	P	E	V	F	S	L	P	D	M	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			B				T	T	T	T																				T											B			T	T				T	T	S				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	L	R	P	K	Y	Q	A	A	L	E	K	A	Q	K	E	S	T	A	T	H	K	K	G	V	G	I	S	I	G	V	Y	G	S	G	L	D	G	P	D	A	S	E	A	W	A	E	L	N	A	D	G	T	I	T	V	H	T	A	W	E	D	H	G	Q	G	A	D	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S														S	S	S	T	T	T											T	T	S											S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	V	G	T	A	H	E	A	L	R	P	M	G	V	A	P	E	K	I	K	F	T	W	P	N	T	A	T	T	P	N	S	G	P	S	G	G	S	R	Q	Q	V	M	T	G	N	A	I	R	V	A	C	E	N	L	L	K	A	C	E	K	P	G	G	G	Y	Y	T	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	T			G	G	G							B	T	T	T	S						S		T	T																						B		T	T	S	S	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	L	K	A	A	D	K	P	T	K	I	T	G	N	W	T	A	S	G	A	T	H	C	D	A	V	T	G	L	G	K	P	F	V	V	Y	M	Y	G	V	F	M	A	E	V	T	V	D	V	A	T	G	Q	T	T	V	D	G	M	T	L	M	A	D	L	G	S	L	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												T	T		B				T	T	T			S	B			S															T	T	T															S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	L	A	T	D	G	Q	I	Y	G	G	L	A	Q	G	I	G	L	A	L	S	E	D	F	E	D	I	K	K	H	A	T	L	V	G	A	G	F	P	F	I	K	Q	I	P	D	K	L	D	I	V	Y	V	N	H	P	R	P	D	G	P	F	G	A	S	G	V	G	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T					S	T	T	T	S	S	S	T	T	T	T	T				G	G	G	S		S												T	T	S	G	G	G					T	T	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Sequence	P	L	T	S	P	H	A	A	I	I	N	A	I	K	S	A	T	G	V	R	I	Y	R	L	P	A	Y	P	E	K	V	L	E	A	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S	S														S					B	S

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PDB structure

FASTA sequence

Hidden Markov model

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