PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1viza_

Fold library id	Fold	Superfamily	Family
d1viza_	TIM beta/alpha-barrel	FMN-linked oxidoreductases	FMN-linked oxidoreductases

Links to external resources
Added to library: Tue Mar 16 12:27:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L Y D V T E W K H V F K L D P N K D L P D E Q L E I L C E S G T D A V I I G G T E D N V L R M M S K V R R F L V P C V L E V S A I E A I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T S
T S
S
T T S S S
S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P G F D L Y F I P S V L N S K N A D W I V G M H Q K A M K E Y G E L M S M E E I V A E G Y C I A N P D C K A A A L T E A D A D L N M D D I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T B S S G G G T T
S
T T S T T B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A Y A R V S E L L Q L P I F Y L E Y S G V L G D I E A V K K T K A V L E T S T L F Y G G G I K D A E T A K Q Y A E H A D V I V V G N A V Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S
T
S S S S S
S T T
S
T

. . . . . . . . . 220 . . . . .

Sequence D F D R A L K T V A A V K G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	Y	D	V	T	E	W	K	H	V	F	K	L	D	P	N	K	D	L	P	D	E	Q	L	E	I	L	C	E	S	G	T	D	A	V	I	I	G	G	T	E	D	N	V	L	R	M	M	S	K	V	R	R	F	L	V	P	C	V	L	E	V	S	A	I	E	A	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G									T	T	S												T	S			S																			T	T	S	S	S							S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	F	D	L	Y	F	I	P	S	V	L	N	S	K	N	A	D	W	I	V	G	M	H	Q	K	A	M	K	E	Y	G	E	L	M	S	M	E	E	I	V	A	E	G	Y	C	I	A	N	P	D	C	K	A	A	A	L	T	E	A	D	A	D	L	N	M	D	D	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S								T	T	B	S	S	G	G	G	T	T																	S												T	T	S						T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	Y	A	R	V	S	E	L	L	Q	L	P	I	F	Y	L	E	Y	S	G	V	L	G	D	I	E	A	V	K	K	T	K	A	V	L	E	T	S	T	L	F	Y	G	G	G	I	K	D	A	E	T	A	K	Q	Y	A	E	H	A	D	V	I	V	V	G	N	A	V	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S							T	T	S													T		S	S	S						S	S			S									T	T		S						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	D	F	D	R	A	L	K	T	V	A	A	V	K	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T