PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1vd6a1

Fold library id	Fold	Superfamily	Family
d1vd6a1	TIM beta/alpha-barrel	PLC-like phosphodiesterases	Glycerophosphoryl diester phosphodiesterase

Links to external resources
Added to library: Tue Mar 16 13:39:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P L R L G H R G A P L K A K E N T L E S F R L A L E A G L D G V E L D V W P T R D G V F A V R H D P D T P L G P V F Q V D Y A D L K A Q E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T T S
T T S T T
S
T T S
S
S T T G G G S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D L P R L E E V L A L K E A F P Q A V F N V E L K S F P G L G E E A A R R L A A L L R G R E G V W V S S F D P L A L L A L R K A A P G L P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B G G G G T
T T
T T S T T T
S S S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G F L M A E D H S A L L P C L G V E A V H P H H A L V T E E A V A G W R K R G L F V V A W T V N E E G E A R R L L A L G L D G L I G D R P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G G G G S
S B G G G
T T
T T
S S

. . . . . . .

Sequence V L L P L G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	R	L	G	H	R	G	A	P	L	K	A	K	E	N	T	L	E	S	F	R	L	A	L	E	A	G	L	D	G	V	E	L	D	V	W	P	T	R	D	G	V	F	A	V	R	H	D	P	D	T	P	L	G	P	V	F	Q	V	D	Y	A	D	L	K	A	Q	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		T	T	T	S		T	T	S										T	T		S										T	T	S						S		S			T	T			G	G	G	S									S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	P	R	L	E	E	V	L	A	L	K	E	A	F	P	Q	A	V	F	N	V	E	L	K	S	F	P	G	L	G	E	E	A	A	R	R	L	A	A	L	L	R	G	R	E	G	V	W	V	S	S	F	D	P	L	A	L	L	A	L	R	K	A	A	P	G	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			B						G	G	G	G	T		T	T											T	T	S												T	T	T		S	S						S													T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	F	L	M	A	E	D	H	S	A	L	L	P	C	L	G	V	E	A	V	H	P	H	H	A	L	V	T	E	E	A	V	A	G	W	R	K	R	G	L	F	V	V	A	W	T	V	N	E	E	G	E	A	R	R	L	L	A	L	G	L	D	G	L	I	G	D	R	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			G	G	G	G	G	G	S			S					B	G	G	G												T	T																				T	T		S					S
	.	.	.	.	.	.	.
Sequence	V	L	L	P	L	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S