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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1uoca_

Fold library idFoldSuperfamilyFamily
d1uoca_Ribonuclease H-like motifRibonuclease H-likeCAF1-like ribonuclease


Added to library: Tue Mar 16 12:57:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPIFLPPPNYLFVRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGSKVDYHYQTMRANVDFLNPIQLGL
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Known secondary structure (DSSP)






GGGG


TTTTTTS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMD
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Known secondary structure (DSSP)
TT



SSS
SB


TT




TT


B
TSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMPNFYDLNLVYKIIQEFKNQYSLTTLADEL
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Known secondary structure (DSSP) TTSSSTTTTS


SS
SSTTT



ST
 .........220.........230.........240.........250.........260...
Sequence GLPRFSIFTTTGGQSLLMLLSFCQLSKLSMHKFPNGTDFAKYQGVIYGIDGDQ
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Known secondary structure (DSSP) T



GGGGSTTTB
TTS
BGGGGTT
SS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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