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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1umdb1

Fold library idFoldSuperfamilyFamily
d1umdb1Thiamin diphosphate-binding fold (THDP-binding)Thiamin diphosphate-binding fold (THDP-binding)Branched-chain alpha-keto acid dehydrogenase Pyr module


Added to library: Tue Mar 16 12:17:24 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMA
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Known secondary structure (DSSP)


TTTT
STT

TTSTTTT
TTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTA
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Known secondary structure (DSSP) T

SSGGG
GGGTTTTTTTSS




SSSS
GGGSS


TST
 .........150.........160.........170.........180......
Sequence GLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKEEVPEE
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Known secondary structure (DSSP) T


S
SS
GGGSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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