Fold library entry viewer: d1ukca_

Added to library: Tue Mar 16 12:25:39 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	N	A	Q	P	V	I	N	L	G	Y	A	R	Y	Q	G	V	R	L	E	A	G	V	D	E	F	L	G	M	R	Y	A	S	P	P	I	G	D	L	R	F	R	A	P	Q	D	P	P	A	N	Q	T	L	Q	S	A	T	E	Y	G	P	I	C	I	G	L	D	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S						S	S									T	T	S									S	S					G	G	G	T	T	S										S					B	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	P	G	D	I	S	E	D	C	L	F	I	N	V	F	K	P	S	T	A	T	S	Q	S	K	L	P	V	W	L	F	I	Q	G	G	G	Y	A	E	N	S	N	A	N	Y	N	G	T	Q	V	I	Q	A	S	D	D	V	I	V	F	V	T	F	N	Y	R	V	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	T			S											T	T			T	T												S	T	T	T	S			S		S										T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	G	F	L	A	S	E	K	V	R	Q	N	G	D	L	N	A	G	L	L	D	Q	R	K	A	L	R	W	V	K	Q	Y	I	E	Q	F	G	G	D	P	D	H	I	V	I	H	G	V	S	A	G	A	G	S	V	A	Y	H	L	S	A	Y	G	G	K	D	E	G	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		T	T																	G	G	G	G	T												T											T	G	G	G	T				S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	G	A	I	V	E	S	S	F	W	P	T	Q	R	T	V	S	E	M	E	F	Q	F	E	R	F	V	N	D	T	G	C	S	S	A	R	D	S	L	E	C	L	R	E	Q	D	I	A	T	I	Q	K	G	N	T	G	S	P	F	P	G	G	S	S	S	P	L	P	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S									S	G	G	G											T	T		T	T		S	S								S									S	S					T	T			S	S	S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	F	L	P	V	T	D	G	S	L	V	P	D	E	L	Y	N	A	F	D	A	G	N	F	I	K	V	P	V	L	V	G	D	D	T	D	E	G	S	N	F	A	Y	N	A	S	S	S	A	D	V	S	R	F	F	K	N	N	Y	P	N	L	T	S	Q	Q	L	N	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S	S	S	S		S									T		S											T	B	G	G	G	G	T	S				S	S												S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Q	V	Y	P	R	G	K	L	L	P	R	H	A	A	Y	F	G	A	S	S	A	A	Y	G	D	A	T	F	T	C	P	G	N	H	V	A	S	S	A	A	R	Y	L	P	N	S	V	W	N	Y	R	V	N	I	I	D	E	S	N	I	A	G	G	I	G	V	P	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S			T	T	S		T	T													T																G	G	G																T	T			S	B	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	E	L	P	A	I	F	G	A	G	S	T	G	T	L	S	S	D	S	S	Y	L	T	Y	N	A	A	I	I	P	V	T	M	H	Y	F	I	S	F	V	Q	T	L	N	P	N	T	Y	R	Y	A	T	A	P	E	W	N	T	W	G	N	G	Q	R	L	R	L	Q	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							T	T	T	T	S				T	T		G	G	G	T	T	T	T	T																S		T	T	T	T			T	T								T	T	T							T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Sequence	D	T	A	M	E	A	V	P	E	S	S	L	Q	D	C	A	F	W	K	S	L	T	V	P	M	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T					T

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PDB structure

FASTA sequence

Hidden Markov model

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