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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1ud2a2

Fold library idFoldSuperfamilyFamily
d1ud2a2TIM beta/alpha-barrel(Trans)glycosidasesAmylase, catalytic domain


Added to library: Tue Mar 16 13:14:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQK
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Known secondary structure (DSSP)








TT


SS
T




SSSTT

SSSTT
SS
S
BT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTVRTKYGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTG
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Known secondary structure (DSSP) TBSS
SS

TT


S


STT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence FDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQD
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Known secondary structure (DSSP) B

GGGTTSS



B
GGGTTTTTT



SS


TTS




SS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELKDWGSWFTDELDLDGYRLDAIKHIPFWYTSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWE
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Known secondary structure (DSSP) T
STTGGGS

SS





S
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHAVTFVDNHDTQPGESLESWVADWFKPLAYAT
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Known secondary structure (DSSP) S

TTS
GGGTTTT

GGG
S

TTTSTTSTT




TTT
 .........360.........370.........380.........390
Sequence ILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQN
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Known secondary structure (DSSP) SSSSS
BGGGTB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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