PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1u0va1

Fold library id	Fold	Superfamily	Family
d1u0va1	Thiolase-like	Thiolase-like	Chalcone synthase-like

Links to external resources
Added to library: Tue Mar 16 12:08:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A Q R A E G P A T I L A I G T A N P A N C V E Q S T Y P D F Y F K I T N S E H K T E L K E K F Q R M C D K S M I K R R Y M Y L T E E I L K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T T T
T T
T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N P N V C E Y M A P S L D A R Q A M L A M E V P R L G K E A A V K A I K E W G Q P K S K I T H L I V C S T T T P D L P G A D Y Q L T K L L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G S S S
S
S
G G G
S
S S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L R P Y V K R V G V F Q H G C F A G G T V L R L A K D L A E N N K G A R V L V V C S E V T A V T F R G P S D T H L D S L V G Q A L F G D G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T T S T T
G G G T
T T

. . . . . . . . . 220 . . . . .

Sequence A A L I V G S D P V P E I E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Q	R	A	E	G	P	A	T	I	L	A	I	G	T	A	N	P	A	N	C	V	E	Q	S	T	Y	P	D	F	Y	F	K	I	T	N	S	E	H	K	T	E	L	K	E	K	F	Q	R	M	C	D	K	S	M	I	K	R	R	Y	M	Y	L	T	E	E	I	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S													S					S	T	T									T	T		T	T														T	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	P	N	V	C	E	Y	M	A	P	S	L	D	A	R	Q	A	M	L	A	M	E	V	P	R	L	G	K	E	A	A	V	K	A	I	K	E	W	G	Q	P	K	S	K	I	T	H	L	I	V	C	S	T	T	T	P	D	L	P	G	A	D	Y	Q	L	T	K	L	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	S	S	S		S																														S		G	G	G									S				S	S	S											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	R	P	Y	V	K	R	V	G	V	F	Q	H	G	C	F	A	G	G	T	V	L	R	L	A	K	D	L	A	E	N	N	K	G	A	R	V	L	V	V	C	S	E	V	T	A	V	T	F	R	G	P	S	D	T	H	L	D	S	L	V	G	Q	A	L	F	G	D	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S			T	T															T	S	T	T											G	G	G	T						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	A	A	L	I	V	G	S	D	P	V	P	E	I	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			T	T	T