Fold library entry viewer: d1tv5a1

Added to library: Tue Mar 16 12:16:16 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	E	S	Y	N	P	E	F	F	L	Y	D	I	F	L	K	F	C	L	K	Y	I	D	G	E	I	C	H	D	L	F	L	L	L	G	K	Y	N	I	L	P	Y	D	T	S	N	D	S	I	Y	A	C	T	N	I	K	H	L	D	F	I	N	P	F	G	V	A	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T															S															T	T		S					S				G	G	G					T	T				S	S	S					T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	K	N	G	V	C	I	D	S	I	L	K	L	G	F	S	F	I	E	I	G	T	I	T	P	R	G	Q	T	G	N	A	K	P	R	I	F	R	D	V	E	S	R	S	I	I	N	S	C	G	F	N	N	M	G	C	D	K	V	T	E	N	L	I	L	F	R	K	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T		S	S						T	T	T		S									S	S		B			S		S							T	T	T	T								S		B	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	E	D	K	L	L	S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T	T	T											T	T		S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	S	S	S										S																	T	T		S								B	S						G	G	G	T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T		S						S	S			S										T	T							S							G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Sequence	L	N	H	L	L	Y	Q	R	G	Y	Y	N	L	K	E	A	I	G	R	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		S	S	S	G	G	G	T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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