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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1sska_ | Coronavirus RNA-binding domain | Coronavirus RNA-binding domain | Coronavirus RNA-binding domain |
Added to library: Tue Mar 16 12:26:54 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | G | S | S | H | H | H | H | H | H | S | S | G | L | V | P | R | G | S | A | M | G | L | P | N | N | T | A | S | W | F | T | A | L | T | Q | H | G | K | E | E | L | R | F | P | R | G | Q | G | V | P | I | N | T | N | S | G | P | D | D | Q | I | G | Y | Y | R | R | A | T | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | R | V | R | G | G | D | G | K | M | K | E | L | S | P | R | W | Y | F | Y | Y | L | G | T | G | P | E | A | S | L | P | Y | G | A | N | K | E | G | I | V | W | V | A | T | E | G | A | L | N | T | P | K | D | H | I | G | T | R | N | P | N | N | N | A | A | T | V | L | Q | L | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | ||||||||||||||||||||||
Sequence | Q | G | T | T | L | P | K | G | F | Y | A | E | G | S | R | G | G | S | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | ![]() | ![]() | S |
Download: | PDB structure | FASTA sequence |
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