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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1smxa_ | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like |
Added to library: Tue Mar 16 12:47:49 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | N | I | Y | K | G | K | I | T | R | I | E | P | S | L | E | A | A | F | V | D | Y | G | A | E | R | H | G | F | L | P | L | K | E | I | A | R | E | Y | F | P | A | N | Y | S | A | H | G | R | P | N | I | K | D | V | L | R | E | G | Q | E | V | I | V | Q | I | D | K | E | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | G | G | G | S | G | G | G | S | S | S | S | S | G | G | G | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Sequence | R | G | N | K | G | A | A | L | T | T | F | I | S | L | A | G | S | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | B | ![]() | ![]() | ![]() | S | T | T |
Download: | PDB structure | FASTA sequence |
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