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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1sdwa1 | Nucleoplasmin-like/VP (viral coat and capsid proteins) | PHM/PNGase F | Peptidylglycine alpha-hydroxylating monooxygenase, PHM |
Added to library: Tue Mar 16 13:31:11 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | N | E | C | L | G | T | I | G | P | V | T | P | L | D | A | S | D | F | A | L | D | I | R | M | P | G | V | T | P | K | E | S | D | T | Y | F | C | M | S | M | R | L | P | V | D | E | E | A | F | V | I | D | F | K | P | R | A | S | M | D | T | V | H | H | M | L | L | F | G | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | N | M | P | S | S | T | G | S | Y | W | F | C | D | E | G | T | C | T | D | K | A | N | I | L | Y | A | W | A | R | N | A | P | P | T | R | L | P | K | G | V | G | F | R | V | G | G | E | T | G | S | K | Y | F | V | L | Q | V | H | Y | G | D | I | S | A | F | R | D | N | H | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | B | S | S | S | S | ![]() | ![]() | G | G | G | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | T | T | ![]() | ![]() | ![]() | S | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | G |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | ||||
Sequence | D | C | S | G | V | S | V | H | L | T | R | V | P | Q | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S |
Download: | PDB structure | FASTA sequence |
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