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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1sbpa_

Fold library idFoldSuperfamilyFamily
d1sbpa_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 12:36:33 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KDIQLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVN
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Known secondary structure (DSSP)

STTS
S
TT


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIAERGRIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAA
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Known secondary structure (DSSP) TTSS
TTGGGGS
SB
TT
TT


SGGGGGSTT




TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEI
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Known secondary structure (DSSP) TTT
T

SSTS


STTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKL
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Known secondary structure (DSSP)

S
B


T
GGGSTT
S
TGGGS


 .........290.........300.........
Sequence FTIDEVFGGWAKAQKDHFADGGTFDQISK
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Known secondary structure (DSSP)
SSTSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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