Fold library entry viewer: d1s4bp_

Added to library: Tue Mar 16 12:32:47 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	R	W	D	L	S	A	Q	Q	I	E	E	R	T	R	E	L	I	E	Q	T	K	R	V	Y	D	Q	V	G	T	Q	E	F	E	D	V	S	Y	E	S	T	L	K	A	L	A	D	V	E	V	T	Y	T	V	Q	R	N	I	L	D	F	P	Q	H	V	S	P	S	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T			G	G	G			T	T	T	T																				S						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	T	A	S	T	E	A	D	K	K	L	S	E	F	D	V	E	M	S	M	R	E	D	V	Y	Q	R	I	V	W	L	Q	E	K	V	Q	K	D	S	L	R	P	E	A	A	R	Y	L	E	R	L	I	K	L	G	R	R	N	G	L	H	L	P	R	E	T	Q	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T															S		T	T		S																		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	K	R	I	K	K	K	L	S	L	L	C	I	D	F	N	K	N	L	N	E	D	T	T	F	L	P	F	T	L	Q	E	L	G	G	L	P	E	D	F	L	N	S	L	E	K	M	E	D	G	K	L	K	V	T	L	K	Y	P	H	Y	F	P	L	L	K	K	C	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T	T	T	T	T	T			T	T	T	T	T	S	S				T	T	S						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	E	T	R	R	K	V	E	E	A	F	N	S	R	C	K	E	E	N	S	A	I	L	K	E	L	V	T	L	R	A	Q	K	S	R	L	L	G	F	H	T	H	A	D	Y	V	L	E	M	N	M	A	K	T	S	Q	T	V	A	T	F	L	D	E	L	A	Q	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T																						T	T		S	S							T	T	S	T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	L	G	E	Q	E	R	A	V	I	L	E	L	K	R	A	E	C	E	R	R	G	L	P	F	D	G	R	I	R	A	W	D	M	R	Y	Y	M	N	Q	V	E	E	T	R	Y	C	V	D	Q	N	L	L	K	E	Y	F	P	V	Q	V	V	T	H	G	L	L	G	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T					S	S			T	T	T													T									T	T		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	E	L	L	G	L	A	F	H	H	E	E	G	A	S	A	W	H	E	D	V	R	L	Y	T	A	R	D	A	A	S	G	E	V	V	G	K	F	Y	L	D	L	Y	P	R	E	G	K	Y	G	H	A	A	C	F	G	L	Q	P	G	C	L	R	Q	D	G	S	R	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T							T	T				S	S	T	T									T	T	T												S			T	T	S		S	S													T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	I	A	A	M	V	A	N	F	T	K	P	T	A	D	A	P	S	L	L	Q	H	D	E	V	E	T	Y	F	H	E	F	G	H	V	M	H	Q	L	C	S	Q	A	E	F	A	M	F	S	G	T	H	V	E	R	D	F	V	E	A	P	S	Q	M	L	E	N	W	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	T	T	B			B																									S	S	G	G	G	S	T	T		S		T	T	T	T	T								G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	Q	E	P	L	L	R	M	S	R	H	Y	R	T	G	S	A	V	P	R	E	L	L	E	K	L	I	E	S	R	Q	A	N	T	G	L	F	N	L	R	Q	I	V	L	A	K	V	D	Q	A	L	H	T	Q	T	D	A	D	P	A	E	E	Y	A	R	L	C	Q	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T				T	T	T															G	G	G	T	T																			T	T		S	S														T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	G	V	P	A	T	P	G	T	N	M	P	A	T	F	G	H	L	A	G	G	Y	D	A	Q	Y	Y	G	Y	L	W	S	E	V	Y	S	M	D	M	F	H	T	R	F	K	Q	E	G	V	L	N	S	K	V	G	M	D	Y	R	S	C	I	L	R	P	G	G	S	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S				T	T			G	G	G	G		G	G	G	G	T	T		T	T	T	T	T																T						T	T												T	T	T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Sequence	A	S	A	M	L	R	R	F	L	G	R	D	P	K	Q	D	A	F	L	L	S	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S				S							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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