PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1rwta_

Fold library id	Fold	Superfamily	Family
d1rwta_	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein

Links to external resources
Added to library: Tue Mar 16 11:58:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S P W Y G P D R V K Y L G P F S G E S P S Y L T G E F P G D Y G W D T A G L S A D P E T F A K N R E L E V I H C R W A M L G A L G C V F P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T T
T T G G G G
S
T T
S
S T T
S
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L A R N G V K F G E A V W F K A G S Q I F S E G G L D Y L G N P S L V H A Q S I L A I W A C Q V I L M G A V E G Y R I A G G P L G E V V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S G G G G G S T T
B
G G G
T T S
B
B T T B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P L Y P G G S F D P L G L A D D P E A F A E L K V K E I K N G R L A M F S M F G F F V Q A I V T G K G P L E N L A D H L A D P V N N N A W N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G
T T
T T
S
S
T T T S S G G G

. . . . . . . .

Sequence F A T N F V P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	P	W	Y	G	P	D	R	V	K	Y	L	G	P	F	S	G	E	S	P	S	Y	L	T	G	E	F	P	G	D	Y	G	W	D	T	A	G	L	S	A	D	P	E	T	F	A	K	N	R	E	L	E	V	I	H	C	R	W	A	M	L	G	A	L	G	C	V	F	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	T	T				T	T	G	G	G	G		S			T	T			S		S	T	T			S			T	T		T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	A	R	N	G	V	K	F	G	E	A	V	W	F	K	A	G	S	Q	I	F	S	E	G	G	L	D	Y	L	G	N	P	S	L	V	H	A	Q	S	I	L	A	I	W	A	C	Q	V	I	L	M	G	A	V	E	G	Y	R	I	A	G	G	P	L	G	E	V	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T				S			S					G	G	G	G	G	S	T	T		B		G	G	G		T	T	S			B																									B	T	T	B			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	Y	P	G	G	S	F	D	P	L	G	L	A	D	D	P	E	A	F	A	E	L	K	V	K	E	I	K	N	G	R	L	A	M	F	S	M	F	G	F	F	V	Q	A	I	V	T	G	K	G	P	L	E	N	L	A	D	H	L	A	D	P	V	N	N	N	A	W	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				G	G	G		T	T		T	T		S																																		S													T	T	T	S	S	G	G	G
	.	.	.	.	.	.	.	.
Sequence	F	A	T	N	F	V	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T	S	S