Fold library entry viewer: d1rp5a4

Added to library: Tue Mar 16 14:00:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	I	S	S	P	L	Q	S	F	M	E	T	Q	M	D	A	F	Q	E	K	V	K	G	K	Y	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S									T	T	T		B								S			B	T	T	T	T	B	T			S	S						T	T	T	S			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	P	G	S	T	M	K	V	M	M	L	A	A	A	I	D	N	N	T	F	P	G	G	E	V	F	N	S	S	E	L	K	I	A	D	A	T	I	R	D	W	D	V	N	E	G	L	T	G	G	R	M	M	T	F	S	Q	G	F	A	H	S	S	N	V	G	M	T	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G												T				T	T						S					T	T										T	T	S		S													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	K	M	G	D	A	T	W	L	D	Y	L	N	R	F	K	F	G	V	P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	D	N	I	V	N	I	A	M	S	A	F	G	Q	G	I	S	V	T	Q	T	Q	M	L	R	A	F	T	A	I	A	N	D	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	T	S					S		S	S					B				S	S								T	T	T		S		B	B														T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	L	E	P	K	F	I	S	A	L	Y	D	P	N	D	Q	S	V	R	K	S	Q	K	E	I	V	G	N	P	V	S	K	E	A	A	S	V	T	R	D	H	M	V	M	V	G	T	D	P	T	Y	G	T	M	Y	N	H	S	T	G	K	A	T	V	N	V	P	G	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B								T	T	T	T														S																			T	T	T		T	T	B		T	T	T	S	S	B	S	S		B	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	A	L	K	S	G	T	A	E	I	A	D	E	K	N	G	G	Y	L	T	G	S	T	N	N	I	F	S	V	V	S	M	H	P	A	E	N	P	D	F	I	L	Y	V	T	V	Q	Q	P	E	H	Y	S	G	I	Q	L	G	E	F	A	N	P	I	L	E	R	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B		T	T	T	S	S	B			S	S	S	S										S	T	T	S		S									S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Sequence	M	K	E	S	L	N	L	Q	T	T	A	K	A	L	E	Q	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	T	T	T	S			G	G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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