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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1rgya_

Fold library idFoldSuperfamilyFamily
d1rgya_beta-lactamase/transpeptidase-likebeta-lactamase/transpeptidase-likebeta-Lactamase/D-ala carboxypeptidase


Added to library: Tue Mar 16 12:38:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKTEQQIADIVNRTITPLMQEQAIPGMAVAIIYEGKPYYFTWGKADIANNHPVTQQTLFELGSVSKTFNG
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Known secondary structure (DSSP)


T
STTTTTT

TT
B
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLGGDAIARGEIKLSDPVTKYWPELTGKQWRGISLLHLATYTAGGLPLQIPDDITDKAALLRFYQNWQPQ
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Known secondary structure (DSSP) TTS

TTSB
TT


GGGTT
BTT
SS


SS

TT

S


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence WTPGAKRLYANSSIGLFGALAVKPSGMSYEEAMTRRVLQPLKLAHTWITVPQSEQKNYAWGYREGKPVHV
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Known secondary structure (DSSP) S
TTS


TTTTTS
TTTTTT
TTSS

GGGGGGB

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SPGQLDAEAYGVKSSVIDMARWVQANMDASHVQEKTLQQGIELAQSRYWRIGDMYQGLGWEMLNWPLKAD
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Known secondary structure (DSSP)


TTT



GGG

STSTT
SS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence SIINGSDSKVALAALPAVEVNPPVPAVKASWVHKTGSTGGFGSYVAFVPEKNLGIVMLANKSYPNPVRVE
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Known secondary structure (DSSP) TSTS




SS
SS
GGGTSB


 .........360
Sequence AAWRILEKLQ
Predicted secondary structure
SS confidence









Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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