Fold library entry viewer: d1r6va_

Added to library: Tue Mar 16 13:03:27 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	A	K	D	L	A	S	L	P	E	I	K	S	Q	G	Y	H	I	L	F	G	E	L	R	D	G	E	Y	T	E	G	K	I	L	V	G	Y	N	D	R	S	E	V	D	K	I	V	K	A	V	N	G	K	V	V	L	E	L	P	Q	I	K	V	V	S	I	K	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	T	T			B										B					T	T	S	B		T	T							S	S												T								G	G	G	T							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	M	T	V	K	Q	A	Y	D	K	I	K	A	L	A	L	K	G	I	R	Y	V	E	P	S	Y	K	R	E	L	I	K	P	T	V	V	K	P	N	P	D	M	Y	K	I	R	K	P	G	L	N	S	T	A	R	D	Y	G	E	E	L	S	N	E	L	W	G	L	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T	T	S			S	S								B														T	T	T	T		S	S	S	S			S	S	S	T	T			S	S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	G	V	T	Q	Q	L	W	E	E	A	S	G	T	N	I	I	V	A	V	V	D	T	G	V	D	G	T	H	P	D	L	E	G	Q	V	I	A	G	Y	R	P	A	F	D	E	E	L	P	A	G	T	D	S	S	Y	G	G	S	A	G	T	H	V	A	G	T	I	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										S		T	T								S			B	T	T	S	G	G	G	T	T	T	B						G	G	G	T					T	T		B			T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	K	D	G	K	G	I	V	G	V	A	P	G	A	K	I	M	P	I	V	I	F	D	D	P	A	L	V	G	G	N	G	Y	V	G	D	D	Y	V	A	A	G	I	I	W	A	T	D	H	G	A	K	V	M	N	H	S	W	G	G	W	G	Y	S	Y	T	M	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S				S		T	T	S							S	B								T	T	S	B																T	T		S								B	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	D	Y	A	M	E	H	G	V	V	M	V	V	S	A	G	N	N	T	S	D	S	H	H	Q	Y	P	A	G	Y	P	G	V	I	Q	V	A	A	L	D	Y	Y	G	G	T	F	R	V	A	G	F	S	S	R	S	D	G	V	S	V	G	A	P	G	V	T	I	L	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									S		S	S	S					B	T	T	T	S	T	T											T	T						S	S	S				T	T								S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	P	G	E	D	S	I	G	Y	E	G	H	N	E	N	V	P	A	T	N	G	G	T	Y	D	Y	Y	Q	G	T	S	M	A	A	P	H	V	T	G	V	V	A	V	L	L	Q	K	F	P	N	A	K	P	W	Q	I	R	K	L	L	E	N	T	A	F	D	F	N	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	T	T						T	T				S	S	S								S																				T	T															B		S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	W	D	H	D	T	G	Y	G	L	V	K	L	D	A	A	L	Q	G	P	L	P	T	Q	G	G	V	E	E	F	Q	V	V	V	T	D	A	K	G	N	F	G	V	P	T	V	F	V	S	M	M	R	D	N	G	S	C	Y	Y	A	K	T	G	P	D	G	I	A	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B	T	T	T	B	T		B													S	S	S												T	T	S		S	B		T	T								S	S	S									T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	H	I	D	S	G	T	Y	D	I	F	V	G	G	P	D	H	W	D	R	A	L	A	P	Y	D	G	E	S	I	P	G	G	Y	A	I	A	L	R	M	A	E	E	R	Q	A	S	F	V	G	F	G	V	S	P	D	A	T	Q	L	N	V	N	F	N	S	T	L	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S			S		T	T	T	S						S		S	S		S		G	G	G												B	T	T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	F	S	T	N	L	S	T	L	K	D	P	Q	F	V	V	V	D	P	L	L	R	G	V	Y	G	R	V	A	Y	A	R	N	Q	T	Y	D	L	S	L	L	S	G	Q	I	S	F	G	I	Q	T	L	L	P	A	A	T	D	I	T	I	Q	G	T	V	T	L	N	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S	S								T	T		S										T	T						T	T												S	S			S	S											T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Sequence	D	I	P	V	Y	G	V	L	K	A	G	T	T	W	T	I	I	D	D	F	G	G	L	N	L	G	T	D	S	Q	P	I	Y	V	W	W	T	I	F	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S					B	T	T	S	S		B	S	S		S	S	S			B

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PDB structure

FASTA sequence

Hidden Markov model

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