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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1qw9a2

Fold library idFoldSuperfamilyFamily
d1qw9a2TIM beta/alpha-barrel(Trans)glycosidasesbeta-glycanases


Added to library: Tue Mar 16 13:34:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EIDKRIYGSFIEHLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGP
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Known secondary structure (DSSP)


GGGG

SSTTSTBTTTB
TT
TTB
TTSBBT

S
SGGGGG

GGGGSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRI
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Known secondary structure (DSSP) GGG


TTTT

SS
T


SS



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWE
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Known secondary structure (DSSP) TT

S




SS


STTSTT



TT



S
TTSTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ATVLDHTYDHVDYISLHQYYGNRDNDTANYLALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNV
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Known secondary structure (DSSP) GGG
S

TT

TTTT
S


 .........290.........300.........310.........320.........330.........340.........350
Sequence WYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITLMKHADRVKIACLAQLVNVIAPIMTEKNGPA
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Known secondary structure (DSSP)

TTTT

TTBSS

TT




TTTT
SBSSS
S
TTS
 .........360.......
Sequence WKQTIYYPFMHASVYGR
Predicted secondary structure




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Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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