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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1qu5a_ | SMAD/FHA domain | SMAD/FHA domain | FHA domain |
Added to library: Tue Mar 16 13:26:46 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | A | E | T | R | E | Q | K | L | L | H | S | N | N | T | E | N | V | K | S | S | K | K | K | G | N | G | R | F | L | T | L | K | P | L | P | D | S | I | I | Q | E | S | L | E | I | Q | Q | G | V | N | P | F | F | I | G | R | S | E | D | C | N | C | K | I | E | D | N | R | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | T | T | G | G | G | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | S | S | S | S | B | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | T | T | S | S | S | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | S | R | V | H | C | F | I | F | K | K | R | H | A | V | G | K | S | M | Y | E | S | P | A | Q | G | L | D | D | I | W | Y | C | H | T | G | T | N | V | S | Y | L | N | N | N | R | M | I | Q | G | T | K | F | L | L | Q | D | G | D | E | I | K | I | I | W | D | K | N | N | K | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | T | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Sequence | V | I | G | F | K | V | E | I | N | D | T | T | G | L | F | N | E | G | L | G | M | L | Q | E | Q | R | V | V | L | K | Q | T | A | E | E | K | D | L | V | K | K | L | ||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | G | G | G | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G |
Download: | PDB structure | FASTA sequence |
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