Fold library entry viewer: d1qgra_

Added to library: Tue Mar 16 14:37:44 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	L	I	T	I	L	E	K	T	V	S	P	D	R	L	E	L	E	A	A	Q	K	F	L	E	R	A	A	V	E	N	L	P	T	F	L	V	E	L	S	R	V	L	A	N	P	G	N	S	Q	V	A	R	V	A	A	G	L	Q	I	K	N	S	L	T	S	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G		S																																		T	T	S																			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	I	K	A	Q	Y	Q	Q	R	W	L	A	I	D	A	N	A	R	R	E	V	K	N	Y	V	L	H	T	L	G	T	E	T	Y	R	P	S	S	A	S	Q	C	V	A	G	I	A	C	A	E	I	P	V	N	Q	W	P	E	L	I	P	Q	L	V	A	N	V	T	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S																T	T	T			S	S	S															G	G	G	T			T	T												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	S	T	E	H	M	K	E	S	T	L	E	A	I	G	Y	I	C	Q	D	I	D	P	E	Q	L	Q	D	K	S	N	E	I	L	T	A	I	I	Q	G	M	R	K	E	E	P	S	N	N	V	K	L	A	A	T	N	A	L	L	N	S	L	E	F	T	K	A	N	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																				S						G	G	G													S	T	T		S																G	G	G						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	E	S	E	R	H	F	I	M	Q	V	V	C	E	A	T	Q	C	P	D	T	R	V	R	V	A	A	L	Q	N	L	V	K	I	M	S	L	Y	Y	Q	Y	M	E	T	Y	M	G	P	A	L	F	A	I	T	I	E	A	M	K	S	D	I	D	E	V	A	L	Q	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T		S	S																		S	G	G	G						T	T	T										T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	F	W	S	N	V	C	D	E	E	M	D	L	A	I	E	A	S	E	A	A	E	Q	G	R	P	P	E	H	T	S	K	F	Y	A	K	G	A	L	Q	Y	L	V	P	I	L	T	Q	T	L	T	K	Q	D	E	N	D	D	D	D	D	W	N	P	C	K	A	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S			S	S																					T	T				S	S			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	L	M	L	L	A	T	C	C	E	D	D	I	V	P	H	V	L	P	F	I	K	E	H	I	K	N	P	D	W	R	Y	R	D	A	A	V	M	A	F	G	C	I	L	E	G	P	E	P	S	Q	L	K	P	L	V	I	Q	A	M	P	T	L	I	E	L	M	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	G												T	T		S	S														T	S	S	S	S																					T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	V	V	V	R	D	T	A	A	W	T	V	G	R	I	C	E	L	L	P	E	A	A	I	N	D	V	Y	L	A	P	L	L	Q	C	L	I	E	G	L	S	A	E	P	R	V	A	S	N	V	C	W	A	F	S	S	L	A	E	A	A	Y	E	A	A	D	V	A	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																			G	G	G	T	S	S	T	T	T												T	T	S																						T	T	S		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	E	E	P	A	T	Y	C	L	S	S	S	F	E	L	I	V	Q	K	L	L	E	T	T	D	R	P	D	G	H	Q	N	N	L	R	S	S	A	Y	E	S	L	M	E	I	V	K	N	S	A	K	D	C	Y	P	A	V	Q	K	T	T	L	V	I	M	E	R	L	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	T	T	T												T	T	S		S	S		S	T	T															T			S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	L	Q	M	E	S	H	I	Q	S	T	S	D	R	I	Q	F	N	D	L	Q	S	L	L	C	A	T	L	Q	N	V	L	R	K	V	Q	H	Q	D	A	L	Q	I	S	D	V	V	M	A	S	L	L	R	M	F	S	G	G	V	Q	E	D	A	L	M	A	V	S	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	S			S	T	T																					T	T	S							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	E	V	L	G	G	E	F	L	K	Y	M	E	A	F	K	P	F	L	G	I	G	L	K	N	Y	A	E	Y	Q	V	C	L	A	A	V	G	L	V	G	D	L	C	R	A	L	Q	S	N	I	I	P	F	C	D	E	V	M	Q	L	L	L	E	N	L	G	N	E	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	G	G	G	G																T	T																			G	G	G	G																T		T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	H	R	S	V	K	P	Q	I	L	S	V	F	G	D	I	A	L	A	I	G	G	E	F	K	K	Y	L	E	V	V	L	N	T	L	Q	Q	A	S	Q	A	Q	V	D	K	S	D	Y	D	M	V	D	Y	L	N	E	L	R	E	S	C	L	E	A	Y	T	G	I	V	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																G	G	G	G	G	G	G													T					T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	K	G	D	Q	E	N	V	H	P	D	V	M	L	V	Q	P	R	V	E	F	I	L	S	F	I	D	H	I	A	G	D	E	D	H	T	D	G	V	V	A	C	A	A	G	L	I	G	D	L	C	T	A	F	G	K	D	V	L	K	L	V	E	A	R	P	M	I	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S			G	G	G	G	G	S	G	G	G													T		S																							T								T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
Sequence	L	L	T	E	G	R	R	S	K	T	N	K	A	K	T	L	A	R	W	A	T	K	E	L	R	K	L	K	N	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																				T

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PDB structure

FASTA sequence

Hidden Markov model

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