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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1qaza_

Fold library idFoldSuperfamilyFamily
d1qaza_alpha/alpha toroidChondroitin AC/alginate lyaseAlginate lyase A1-III


Added to library: Tue Mar 16 12:11:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHPFDQAVVKDPTASYVDVKARRTFLQSGQLDDRLKAALPKEYDCTTEATPNPQQGEMVIPRRYLSGNH
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Known secondary structure (DSSP)

STTTT




TT

SS
SS


S




GGG







SS




SBSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GPVNPDYEPVVTLYRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADALLNYDPKSQSWYQVEWSA
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Known secondary structure (DSSP) SSB
TT

TTTTTSSS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ATAAFALSTMMAEPNVDTAQRERVVKWLNRVARHQTSFPGGDTSCCNNHSYWRGQEATIIGVISKDDELF
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Known secondary structure (DSSP) TTTT
SSS
TS


TTTTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RWGLGRYVQAMGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARK
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Known secondary structure (DSSP) TTB
TTS
BTTGGGSGGGTTT


TT

SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence FVFAAVKNPDLIKKYASEPQDTRAFKPGRGDLNWIEYQRARFGFADELGFMTVPIFDPRTGGSATLLAYK
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Known secondary structure (DSSP)
GGGGGGT

S



TT
STT
GGG



TT


SS


BGGGTB


 .
Sequence P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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