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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1q35a_

Fold library idFoldSuperfamilyFamily
d1q35a_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 12:28:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADGLVDRVKQEGELSPADVLLTVDISRVMEIVNADL
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Known secondary structure (DSSP)

SS
GGGT





GGG



S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQKIDSKVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSGKNS
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Known secondary structure (DSSP) B




S
GGGB
TTSS
TTTT
S

TT

GGGGGSGGGTT

S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGNSYYYGKMLDDEKQKS
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Known secondary structure (DSSP) TBSS


S
TS
STSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence WAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEPSAIV
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Known secondary structure (DSSP) T


STT
BBTT
TTS

SSTT



 .........290.........300.........310.......
Sequence KGWGTFKSDTIKLEDIAKNYEAALKLVDEVKFDDFSE
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Known secondary structure (DSSP) T



B



TTTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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