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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1pvc1_

Fold library idFoldSuperfamilyFamily
d1pvc1_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesPicornaviridae-like VP (VP1, VP2, VP3 and VP4)


Added to library: Tue Mar 16 12:21:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDSLPDTKASGPAHSKEVPALTAVETGATNPLAPSDTVQTRHVVQRRSRSESTIESFFARGACVAIIEVD
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Known secondary structure (DSSP)

B


B

B



SS

TT


GGGS





GGGTS
B

B



B
GGGS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NEQPTTRAQKLFAMWRITYKDTVQLRRKLEFFTYSRFDMEFTFVVTANFTNANNGHALNQVYQIMYIPPG
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Known secondary structure (DSSP) S


SS


S

S
SSSTT
SS
S






TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence APTPKSWDDYTWQTSSNPSIFYTYGAAPARISVPYVGLANAYSHFYDGFAKVPLKTDANDQIGDSLYSAM
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Known secondary structure (DSSP) S


SSTTSGGGG
SSS
TTSS




SSSSS


S
S



TT
SSTTTT


TT

 .........220.........230.........240.........250.........260.........270.........
Sequence TVDDFGVLAVRVVNDHNPTKVTSKVRIYMKPKHVRVWCPRPPRAVPYYGPGVDYRNNLDPLSEKGLTTY
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Known secondary structure (DSSP)
SSTT

S


SS





S


SSSS


S








TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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